| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03692 |
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| Symbol | |
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| ID | 6777779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3982866 |
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| End bp | 3985640 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642757145 |
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| Product | TPR domain protein |
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| Protein accession | YP_002127978 |
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| Protein GI | 196158489 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02917] putative PEP-CTERM system TPR-repeat lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAAGC ATAAAACAAA TAAATTAATT AAACGTACAA CGTTAGCGGT TATGTTGACC
AGTGCGCTTT TGTCAGGGTG TAGCGAAAAG TCGATGGAAA GCCACTTGGC AGATGCGAGA
AACTATGTTT CTCAGCAGCA AGTTGATGCA GCCATTGTTG AGTACAAAAA TGCAATTCAA
AAAGGGCCTA ATGCTGCTGA GCCACGCTTC GAGTTAGGCA AGCTTTATTT ACAAAAGAAC
AACTTTGCCG CGGCAGAAAA AGAATTAAAC AAAGCCATGG AGCTTGGTTA TCCCGTAAGT
CAAGTTATCC CTCTTTTATC TGTCGCTTAT CAGCAATCAG GAGCAGAAAA TGCCCTTGCT
GAAGTGGATT ACCGCGCAGA AGGTATGACT GCGGTAGAGT CAGCGGAAGT CGGGTTTTAC
AAGCTTCAGG CGCTTATGCA ATTAGGTAAG ACCGAAGAGG CACAAACGTT AATAGCCGAT
CTTTCTACGC TAGATACAAG CTCGGTATAC AAGGGGCTAA TCGATAGCTA TACGTTTGTT
TTAGACAATG ACATGGAAGG CGCGTTAGCA GCAACTGAAG CGCTGCGCGA ACAAGCACCA
ACCAATAAAG ACGTACTTCA GCAGTTAGCA AAAATCTATC TGCAAAGTGG TGAGCCAGCA
AAAGCCGCTG AAGTCTATGG CGTTTACGTG AGTCATTACC CTGATGATGT TACCAGTAAG
TTTGCCTATG CTTCGCTGCT CATTGAAATA AGAGAACTCG ATAAAGCAGA GCCCATTGTA
GATGATTTGC TAACGCTTAA TGAGAATCAT CCTTTACTCA ATACGTTTAA AGGCATTATT
GAGTCGGCCA ATGAAAACTA TGCCAATGCT TTAGAGTACT TGGAAATTGC GGTGCAAAAC
GGCAGAAGCG ACCAAGTTGT TAGATTGGTC GCTGGGTTTA GTGCATATCA AATTCAAGAT
TTTGAGGCAG CTCAGCGTCA CTTAACCATG GTGGCATCCA GCTTACCTGA TAATCATCCC
GGCCTGCGTA TGTTAGCAGA CAGCATGCTT CAGCTTGGTG AAAATGATGA AGCGCTAGAA
GTATTGGCGC GGGTGGAAGG TGAGCAAGGC GTAGACGCGG CACTTTTCTC AAAGGCGAGC
TATCAGTTAC TTAAAGATGG TAACGTGGTA GGTGCTAAGC AAATGGTAGC AAAGTCTGAG
GCGGTAAGTA CTACGGCTGA TGATTTATCT CGTTTAGGTG TGCTTCAGCT TTCACTTAAC
GACATTGATG GTCTGGTTAA TTTGGAAGAA GCGGTAGAAA AAGCGCCTGA GTCAGTGACA
TCTCAAGCGA CCTTGCTACG CGCTTACATT GCCACCAATC AACTTGATAA AGCCAAGACT
GCGGCAAAAG ACTGGCACGA ACAATCGCCA GAAACTGCTG CGCCACTTAT CTACCTAGGT
AATATTGCTA CTGCTGAAGG TGCGTATCAA GATGCCGCCC AATACCTCGA CAAAGCAAGT
GAACTTAGTG ATGCGGGCAA TGAAGTAACG TATTCACGGG CTAAGCTATT GGTAGCAGAA
GGCAAAAAAG ATAATGCCAT GGCGTTCATT CGCGCATTTG TTGATAAGAA CCCTGCCGAC
GTACAAGCGC TAGCGCTGTG GTTTGCATTA GCCGTTGAAA AAGGCAATGG CGATGAGGTT
ATCGCGCATG CCCAAACGCA GTTTAATGGC AACAAAGATC AGCTTAATTT ACGGCTTTTA
CTCGCAAGAA TGTATTCCCT TAACAATCAG CTTGATAAAA CAGTCTCGCT TTTAGCCGAC
GTAAAAGGCG ACGAGTCATC ACCGCAGGCG TTTTGGAACT TAAAAGGGCA GTCGCTTATT
GCGACTAATA ATGTAAAAGA AGCGACCGCA TTTTTCGATC ATTGGTTATC CCTTTACCCT
CAGGATAAAA ACGCGGTACT GGGCAAACTG CTTATCGTTG ATTCACAAAA GCAGTTTAAG
CAAGGGCTAG CGTTAACCAA CAAGGTGCTA GCAAAACGCC CAGACGCACA ATTAACGCTT
TTAAAAGCGT ATTTCCATAG CCGTTTGGGT CAGGCACAGC CTGCGTGGGA GATCATTAAC
AACACCGCGG ATGATGTTAA AACGCTGCCG TTTGTTAGAG GGGTTATTGC TCGTTTACAC
CTTATCGAGA AAGCGCCAGA GCAGGCGGTA GACCATGCTA AAGCGGCTTA TGATGCCACA
CCTAATTCAG ACAATGCCTT ACTTCTCGTG GCTGCACTAG AAATGTCTGG GAAAAAAGAG
CAGGCCTTTA GTTTTCTACA AAAGCATGTA AAGGCGCATA ACAACGATGT TCAAAGCGCC
ATGCTGTTAG CTGAGCGACA AATTCGCAAC GACAGAGACA GCGCAATTGA AACCTATGAG
CAGGTGTTAA CACAAACGCC GGACAACTTT GTTGTGCTCA ACAACTTAGC TTATTTGGCG
TTTGAAGATA ACGACTTAGC CCGTGCGGAA ACACTTGCCA AAAAAGCGGT ATCACTACAG
CGCGAGAATG CCGATGCGGT CGATACACTG GCCCAAATAC ATATTGCGAA AGGTGAAAAA
GAGGCAGCAC TGGCACTCTA TGAGCAAATT TCTGCGGGGC CGATTGCAAA CGATGAAGTC
TATCTTAATC ACGTAGCCTT GCTGCTTGAA TTAGACAAAG ACGCTTTGGC TAAACGCAGG
CTAGCAAGTA GAGAGTTTAC AACTGAGGCT GCAAAACAAA GGGTGGAAGC GCTTAAAACG
CAGTACGGCT TGTAA
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| Protein sequence | MTKHKTNKLI KRTTLAVMLT SALLSGCSEK SMESHLADAR NYVSQQQVDA AIVEYKNAIQ
KGPNAAEPRF ELGKLYLQKN NFAAAEKELN KAMELGYPVS QVIPLLSVAY QQSGAENALA
EVDYRAEGMT AVESAEVGFY KLQALMQLGK TEEAQTLIAD LSTLDTSSVY KGLIDSYTFV
LDNDMEGALA ATEALREQAP TNKDVLQQLA KIYLQSGEPA KAAEVYGVYV SHYPDDVTSK
FAYASLLIEI RELDKAEPIV DDLLTLNENH PLLNTFKGII ESANENYANA LEYLEIAVQN
GRSDQVVRLV AGFSAYQIQD FEAAQRHLTM VASSLPDNHP GLRMLADSML QLGENDEALE
VLARVEGEQG VDAALFSKAS YQLLKDGNVV GAKQMVAKSE AVSTTADDLS RLGVLQLSLN
DIDGLVNLEE AVEKAPESVT SQATLLRAYI ATNQLDKAKT AAKDWHEQSP ETAAPLIYLG
NIATAEGAYQ DAAQYLDKAS ELSDAGNEVT YSRAKLLVAE GKKDNAMAFI RAFVDKNPAD
VQALALWFAL AVEKGNGDEV IAHAQTQFNG NKDQLNLRLL LARMYSLNNQ LDKTVSLLAD
VKGDESSPQA FWNLKGQSLI ATNNVKEATA FFDHWLSLYP QDKNAVLGKL LIVDSQKQFK
QGLALTNKVL AKRPDAQLTL LKAYFHSRLG QAQPAWEIIN NTADDVKTLP FVRGVIARLH
LIEKAPEQAV DHAKAAYDAT PNSDNALLLV AALEMSGKKE QAFSFLQKHV KAHNNDVQSA
MLLAERQIRN DRDSAIETYE QVLTQTPDNF VVLNNLAYLA FEDNDLARAE TLAKKAVSLQ
RENADAVDTL AQIHIAKGEK EAALALYEQI SAGPIANDEV YLNHVALLLE LDKDALAKRR
LASREFTTEA AKQRVEALKT QYGL
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