| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03672 |
|---|
| Symbol | |
|---|
| ID | 6777458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 3960550 |
|---|
| End bp | 3961779 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642757125 |
|---|
| Product | dipeptidase |
|---|
| Protein accession | YP_002127958 |
|---|
| Protein GI | 196158469 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGTACG TAAATGGTAA AACAGTAAGC GCTTTAGCAC TCTCTTTAGC TTTAACAAGT
GCCTATTCTA ATGCGGAGTC AGTAAAGGCA AGCGATATTC ATGACTCTAT GGTCGTCATG
GATACGCACC TAGATACGCC AGCGCTGCTC GTACAGCCCG GTTTTAATAT TATGCATGCG
CATAATGTTG AGGATGACTT TTCCCAAGTG GATGTTCCAA GAATGGAAAG CGGCGGATTA
GACGGCGGGT TCTGGGTTAT TTACACGCCA CAGGGCCCAG TTACAGTAGA GGGGTTTAAA
TCTGCACGCG ACACAGCGAT TCTTCGTGCT ATGGCTATTC ATAAAATGGT CGAAGCCAAC
CCGGATACAT TTACTCTTGC CACTGATCCA AAAGACGCCA AAGCTATCGC TGATAATGAT
AAGAAAATTG TTTATATCAG TATGGAAAAT GCTTACCCGC TGGGGGAAGA CCTCAGCTTG
TTAGATACTT TCTATAAAAT GGGGCTTAGG ATGGTTGGTC CCGTTCATTT TAAGAATAAC
CAATTTGGCG ATAGTTCCAC TGATCCTAAT GGCCAGCAAT ACGGAGGGCT TTCTCCACTT
GGAGAAAAGC TTGTAAAGAA AGCTAACGAA CTGGGTATAA TTTTGGATGG CTCGCATGCT
CACGACGACT TACTCGAAGA CATGATACGG CTGTCGAAAA CGCCTGTCAT CCTGTCGCAT
TCGGGCACGA AAGCCGTCTA TGATCATCCG AGAAACATCA ATGATGAACT ACTAAAAAAG
TTGGTCGCAA GTGGCGGTGT TATCCATGTC AACGCCTATG GCTCTTACTT AACAGAATTG
CCAAGCGACC CCAAACGCAA GAAAGCGTAT GGGGAATTAT TTAAGCAAAT GGGGAACATT
GCTGAAATGA CGCCAGAGCA AGTGGCTGCG CTAAAGCAAA AACGTAAGCA AATTGATATG
GAGCACCCTG CTGTTCGTGC AACCTTTGAC GATTATATGG CTCACTTTCT TCATATTTTA
AAAGTTGCTG GGCCTAAACA TACTGGGGTG GGTGCAGATT GGGATGGCGG CGGCGGTGTG
GAGCGCATGA TGGATGTTGC CGCTTTACCG CTGATAACAG AGAGGCTTCT AGCCGAAGGC
TACACCAAAG AAGACTTGCA AGATATTTGG GGTAACAACG TGTTGCGGTT GTTAACTCAG
GCACAAGAAT ACGCCCAGTC GCTAAAATGA
|
|---|
| Protein sequence | MRYVNGKTVS ALALSLALTS AYSNAESVKA SDIHDSMVVM DTHLDTPALL VQPGFNIMHA
HNVEDDFSQV DVPRMESGGL DGGFWVIYTP QGPVTVEGFK SARDTAILRA MAIHKMVEAN
PDTFTLATDP KDAKAIADND KKIVYISMEN AYPLGEDLSL LDTFYKMGLR MVGPVHFKNN
QFGDSSTDPN GQQYGGLSPL GEKLVKKANE LGIILDGSHA HDDLLEDMIR LSKTPVILSH
SGTKAVYDHP RNINDELLKK LVASGGVIHV NAYGSYLTEL PSDPKRKKAY GELFKQMGNI
AEMTPEQVAA LKQKRKQIDM EHPAVRATFD DYMAHFLHIL KVAGPKHTGV GADWDGGGGV
ERMMDVAALP LITERLLAEG YTKEDLQDIW GNNVLRLLTQ AQEYAQSLK
|
|---|
| |