Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03602 |
Symbol | |
ID | 6778394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3889949 |
End bp | 3890719 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 642757055 |
Product | hypothetical protein |
Protein accession | YP_002127888 |
Protein GI | 196158399 |
COG category | [V] Defense mechanisms |
COG ID | [COG3440] Predicted restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGATA ATATTTTAGA GCTTGGCAAA GAAATATGTG AAGCGTTTAT TTGCGGTGAT TGGAGATACA TACCAGTATC AAACTTAAGG CATTATGAGC GCAGCAAAGA TGTTATTCGC CGCTGCCATA TATGCCATAG CAACATAGTG TTGATGAAAG AGGGTAAAGA CCCAGCCCAC TTTGAACACC GCCCAGGAAA TCCCGACTGT CTCCTTTCTT ATAACAAACT TGATCCTGAA AAGGATAGAG CGTCCGTCAC TATCACATCA TTGAGCGATG AACAGGTTGA GGAAAGCTAT AACTTTGAGG AATTAATACC GTTTACCTTC AGAGCTAGTA GTGCTCTAGG CACCTTAGCT GATATCGAAG ATATTGAACG AACGCAAATT AACCGAACGC TTCGAAAGCA ATTAATAGAT GCGAGATGTG GGCAAGGAGA ATTCAGAAAA TCTCTAATAT CGTATTGGAA AGCATGTGCA GTAAGCGGCG CAGACAAACT TGAGCTATTA ATTGCATCTC ATATAAAACC TTGGTCTGTT TGTGACAATA AAGAGAGGCT AGACGTATAT AACGGATTCT TGTTATCGCC CAATATCGAT AGGGCTTTTG ATCAAGGTCT AATAAGCTTT AAGAACGATG GTTCAATATT GATTTCAAAA AAATTTGAAT CAGCGCAAGC CTTTGGTATA TGTGAAGACC TGTCAGTTAA TATCGAAGAG CGCCACAAGC CTTATCTTCT ATTCCATCGG GAAAATGTGT TTATAAAATA G
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Protein sequence | MEDNILELGK EICEAFICGD WRYIPVSNLR HYERSKDVIR RCHICHSNIV LMKEGKDPAH FEHRPGNPDC LLSYNKLDPE KDRASVTITS LSDEQVEESY NFEELIPFTF RASSALGTLA DIEDIERTQI NRTLRKQLID ARCGQGEFRK SLISYWKACA VSGADKLELL IASHIKPWSV CDNKERLDVY NGFLLSPNID RAFDQGLISF KNDGSILISK KFESAQAFGI CEDLSVNIEE RHKPYLLFHR ENVFIK
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