Gene MADE_03589 details

Gene Information

• Locus tag: MADE_03589
• ID: 6779067
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Alteromonas macleodii 'Deep ecotype'
• Kingdom: Bacteria
• Replicon accession: NC_011138
• Strand: -
• Start bp: 3876887
• End bp: 3878713
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 642757042
• Product: sulfite reductase, alpha subunit (flavoprotein)
• Protein accession: YP_002127875
• Protein GI: 196158386
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0369] Sulfite reductase, alpha subunit (flavoprotein)
• TIGRFAM ID: [TIGR01931] sulfite reductase [NADPH] flavoprotein, alpha-component

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.715854
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACAAG ATTCTAATTC GAACTCAGCG CCAGGCGCGG TATTAAACGA ACAGCAGTGG 
AATGCGATTA CGCAAGCCAT TGCAGGCTTA AATCGTGATC AACTTACTTG GGTAAGTGGC 
TATGCAGCAG GCATGGCGGC TGCACAAGGC GGTTCGATTG CACCAGCATT GCAAAGTGCT 
CCAGCAGTCG GTGCTGGTGA CGCGCCAACG CTTACTATTT TGTACGGGTC GCAAACCGGT 
AACGCAAAAG GTTTAGCGGC TCAGTGTCAA GCTAAAGCTG AAGAAGCGGG CTTCAACAGC 
AAGCTAGTTA GCATGGCAGA TTACAAGCCA CGTAACTTGA AGTCGGAAAC CCACGTTGCA 
GTATTTGTTA GTACTCACGG GGAAGGCGAT GCACCGGATG ATGCCATTGA ACTGCACGAG 
TTTTTGGCAG GCAAGAAAGC GCCAAAACTT GCCAATACCA AATATGCTGT AGTGGGGTTA 
GGTGACAGCA GTTACGAGTT CTTTTGCCAG ACAGGTAAAG ATTTTGATGA GCGCCTAGGT 
AAACTGGGTG GCAAAGCGAT TATTGAGCGT CTTGACTGTG ATGTTGATTA TGAAGCTGAA 
GCACAAGCGT GGTTAGCTAA ATTAATCGAG TCGTTAAAAG AAGACTTTAG TGCAGCACCG 
CAAACTGCGG TAGCGGCACA AACTGGCGCA GCAGTGCAAG GTGTTGCGGC GCAAACTTAC 
ACCAAAAAGG CACCGTTCAA AGCAACCTTA ATTGAGTCTC AAAAAATCAC AGGGCGTGAT 
TCAATCAAAG ACATCCGCCA TATCGAAATA AGCTTAGAGG ATAGCGGCAT TACTTACCAA 
CCAGGCGATG CGCTTGGTGT TTGGTTTAAA AATGCGCCGT CGTTAGTATC TGAACTTATT 
AGCATATTGT CGTTAAACGG TGATGCAGAG GTAACTGTGG GTGACGCAAC TATGTCACTT 
ACTGATGCAT TAACTTCAAA GCTAGAATTA ACGTTAAGCT ACCCTAACTT TATTAAGTCG 
TACCAAGCAG CAACAGGCTC TGAAACGCTA GCGACGCTCA TGGAAGATAA AGCGCAGCTT 
CGCACTTATA TGGCCGAGCG TCAGATTATC GATATTGCTC GCGACCACCC AGGTAAGATT 
TCAGAACAGC AGCTGGTTGA AGCACTTCGC CCGCTTACCC CACGCTTGTA TTCAATTGCG 
TCAAGCCAAG CAGAAGTTGA AGAAGAAGTT CATTTAACTG TGGCGCACGT TGATTATGAA 
GCGTTCGGCC ATCGTCACCA AGGTGGTGCG TCGGGTTTCC TTTGTGAGTA TTTAGAGGAA 
AACGGTGAAG TTGATGTGTT TGTTGAAAAC AACGACAACT TCCGCTTGCC GGCTGATCCG 
AATACTCCTG TTATTATGGT GGGACCAGGC ACAGGTATTG CACCGTTTAG ATCGTTTATG 
CAAGAGCGTG ACGTACAAGG CGCTGAAGGC AAAAACTGGT TGTTCTTTGG CAACCCACAC 
TTTACGCAAG ATTTCTTGTA TCAAGTAGAG TGGCAAGGTT ACGTTAAAGA AGGCCTGCTA 
GATAAAATTA CGCTGGCGTT CTCCCGTGAT CAGGAAGAGA AAGTATACGT TCAACACCGT 
TTACTTGAAC ACGGTAAAGA GGTGTACGAA TGGCTAGAAC AGGGCGCACA TTTCTATGTG 
TGTGGCGATG CAATGCACAT GGCGAAAGAT GTTGAAAATG CCCTAATTAC TATAGTGCAA 
GAGCACGGCG GTAAGTCAGA AGCCGATGCC AAAGCCTATA TTGTAGAGTT ACGAAAAGCG 
AAGCGTTATC AGAAGGATGT CTATTAA 

 

Protein sequence

MSQDSNSNSA PGAVLNEQQW NAITQAIAGL NRDQLTWVSG YAAGMAAAQG GSIAPALQSA 
PAVGAGDAPT LTILYGSQTG NAKGLAAQCQ AKAEEAGFNS KLVSMADYKP RNLKSETHVA 
VFVSTHGEGD APDDAIELHE FLAGKKAPKL ANTKYAVVGL GDSSYEFFCQ TGKDFDERLG 
KLGGKAIIER LDCDVDYEAE AQAWLAKLIE SLKEDFSAAP QTAVAAQTGA AVQGVAAQTY 
TKKAPFKATL IESQKITGRD SIKDIRHIEI SLEDSGITYQ PGDALGVWFK NAPSLVSELI 
SILSLNGDAE VTVGDATMSL TDALTSKLEL TLSYPNFIKS YQAATGSETL ATLMEDKAQL 
RTYMAERQII DIARDHPGKI SEQQLVEALR PLTPRLYSIA SSQAEVEEEV HLTVAHVDYE 
AFGHRHQGGA SGFLCEYLEE NGEVDVFVEN NDNFRLPADP NTPVIMVGPG TGIAPFRSFM 
QERDVQGAEG KNWLFFGNPH FTQDFLYQVE WQGYVKEGLL DKITLAFSRD QEEKVYVQHR 
LLEHGKEVYE WLEQGAHFYV CGDAMHMAKD VENALITIVQ EHGGKSEADA KAYIVELRKA 
KRYQKDVY