Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03556 |
Symbol | |
ID | 6778051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3833127 |
End bp | 3834059 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642757004 |
Product | ABC transporter, ATP-binding protein |
Protein accession | YP_002127842 |
Protein GI | 196158353 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.333209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCGT TGGATATTCA GGGGTTAACG AAAACCTATA AAGGCGGTGT GCAAGCGCTA AAAGGCGTAG ATCTCACCGT GCAAGAAGGG GACTTCTTCG CACTACTTGG TCCGAATGGG GCGGGTAAAT CTACCACTAT TGGTATCATC AGTTCATTGG TTAACCAAAC AAACGGAAGC GTTTCTGTGT TTGGTTACGA CCTCACAACG CAGAAAGAAC AAGCTAAAGC CTGTATAGGG TTAGTGCCGC AAGAGTTCAA TTTCAATCAG TTTGAAACCG TATTGCAAAT TGTGCTCAAC CAAGCGGGCT ATTATGGCGT TCCGCGTAGC GTAGCCAAGG AGCGCGCTAA AAAGTACTTG GCCCAACTAG ACTTATGGGA AAAGCGCGAT GCACGGGCTC GCGAATTATC TGGCGGTATG AAGCGCAGGC TAATGATAGC TCGCGCGCTT ATGCATGAAC CTAAATTGCT TATTCTCGAC GAGCCAACCG CGGGTGTTGA TATTGAAATT CGCCGCTCTA TGTGGGGCTT TTTAGAAGAG ATCAATCGTC AAGGCATCAC TATTATCCTC ACTACCCACT ACCTTGAAGA AGCAGAAATG CTGTGCCGTA ACATCGCTAT TATTAACAAA GGCACCATCG TAGAAAATAC CAGTATGAAA GCGCTGCTTT CGAAGCTGAA CGTAGAAACC TTTGTGCTGG ACATCAAAAT ACCTGAAACC GCCGCAAAGG CCAGTGGCTT ACTGGCCGGT TTTGAACACC GGCTTATTGA CGACCACACC CTTGAAGTAG ACGTAGAGAA AACCGAAGGC CTAAACCCAG TGTTCACCCA GTTAAGTGAA AAAGGCGTTC AGGTTATGAG CATGCGCAAC AAATCAAATC GCCTTGAAGA GTTGTTTGTA CGTTTAGTTG AATCGGCAAA GCAAGCCGGC TAA
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Protein sequence | MKALDIQGLT KTYKGGVQAL KGVDLTVQEG DFFALLGPNG AGKSTTIGII SSLVNQTNGS VSVFGYDLTT QKEQAKACIG LVPQEFNFNQ FETVLQIVLN QAGYYGVPRS VAKERAKKYL AQLDLWEKRD ARARELSGGM KRRLMIARAL MHEPKLLILD EPTAGVDIEI RRSMWGFLEE INRQGITIIL TTHYLEEAEM LCRNIAIINK GTIVENTSMK ALLSKLNVET FVLDIKIPET AAKASGLLAG FEHRLIDDHT LEVDVEKTEG LNPVFTQLSE KGVQVMSMRN KSNRLEELFV RLVESAKQAG
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