Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03550 |
Symbol | panB |
ID | 6777901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3826746 |
End bp | 3827540 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642756998 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_002127836 |
Protein GI | 196158347 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAG TAACAGTTTC GGGTTTGCTT AAGAAAAAGC AGGCCGGAGA AAAGATCACG TCTTTAACCG CTTATGACGC TAGCTTCGCC AAAATGTTCG ATGAACAAGG CGTTGACGCG CTTCTTATAG GTGACTCTTT AGGCATGGTT CTTCAAGGTG AAGACGACAC CCTCCCCGTC ACTATCGATG ATATTGCGTA TCACACTAAA AGTGTACGTC GCGGTACAGA GCGCGCGTTC GTCTTAGCCG ATATGCCATT TATGTCTTAT GCCACGCCAG AGCAAACCTA TGCAAACGCT GCCAAGTTAA TGGCAGCAGG TGCAAGTATG GTAAAGATGG AAGGCGGTAG TTGGTTGTGC GACACCATTA AAGGGCTGAA CCTGCGCGGT GTACCTGTTT GTGGCCATTT GGGTTTAACA CCGCAATCGG TGCATGTATT TGGCGGGTTT AAAGTCCAAG GTCGTGAGGC AAGCCAAGCA GAGAAGTTAT TAAGCGAAGC AAAAGCTCTT GAAGAAGCGG GTATTCAGCT ATTAGTCCTT GAATGCGTAC CTTCTTCACT AGGCAAAGCT GTTAGCGAAG CACTGACCAT TCCTGTCATT GGCATAGGTG CAGGTAAAGA TACCGATGGC CAAATTTTAG TGATGCATGA CATGTTTGGT ATTAGCGCGA ATTACATGCC TAAGTTCTCT AAGAACTACC TTGTCGAAAC AGGCGATATG CGTAAAGCCG TGTCTAAATA CATTGAAGAC GTACAAAGCG GTGCGTTCCC ATCGCCAGAA CACAGCTTTC AGTAA
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Protein sequence | MKKVTVSGLL KKKQAGEKIT SLTAYDASFA KMFDEQGVDA LLIGDSLGMV LQGEDDTLPV TIDDIAYHTK SVRRGTERAF VLADMPFMSY ATPEQTYANA AKLMAAGASM VKMEGGSWLC DTIKGLNLRG VPVCGHLGLT PQSVHVFGGF KVQGREASQA EKLLSEAKAL EEAGIQLLVL ECVPSSLGKA VSEALTIPVI GIGAGKDTDG QILVMHDMFG ISANYMPKFS KNYLVETGDM RKAVSKYIED VQSGAFPSPE HSFQ
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