Gene MADE_03549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03549 
Symbol 
ID6777958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp3826190 
End bp3826687 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content49% 
IMG OID642756997 
Product7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase 
Protein accessionYP_002127835 
Protein GI196158346 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATAAAG AACACGTATA TATTGGTGTA GGCAGTAACC TTGGCGATAG TGAAGGTAAA 
GCCCAAAAAG CATTCGACGC AATGGGCAAG TTAGAAGATA CCCGTGTTTT AAAGACCTCG 
TCACTGTACT CTAGTAAACC AATGGGCCCA CAGGATCAGC CAGACTACAT CAATGCAGTA 
TGCTTGATAG AAACTGCGTT GAAGCCTCAT GGGCTGCTAA AGCAGCTTCA GCGCATAGAG 
CTTGAAGAGG GCCGTGAGCG CAAAGGCGAA CGCTGGGGCC CTCGGACCCT CGATTTGGAT 
ATTTTGCTAT ACGGCAGTGA AAATATTGAT ACTGCCGACC TAATCATTCC GCACTATGGA 
ATGGCTGAGC GAGAATTCGT CATGGTGCCG CTGTTTGAAA TTGCGCCCAA TATGGTGATG 
CACGACGGCA AGCCGATTTC TGCTTGGGTA GCAAACTGCT CCCTAGATGG ACTTCGACGC 
CTACGCTCTT CCAATTAG
 
Protein sequence
MHKEHVYIGV GSNLGDSEGK AQKAFDAMGK LEDTRVLKTS SLYSSKPMGP QDQPDYINAV 
CLIETALKPH GLLKQLQRIE LEEGRERKGE RWGPRTLDLD ILLYGSENID TADLIIPHYG 
MAEREFVMVP LFEIAPNMVM HDGKPISAWV ANCSLDGLRR LRSSN