Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03548 |
Symbol | |
ID | 6778028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3824878 |
End bp | 3826197 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642756996 |
Product | poly(A) polymerase I |
Protein accession | YP_002127834 |
Protein GI | 196158345 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.339485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCGTG GAGAGCACGG TATATCTCGT GAAGACATAA GTGCAAATGC ATTGAAAGTA ATGTATCGCC TTAATGGAGC AGGCTTCGAA TCGTATTTGG TTGGAGGCTG TGTGCGCGAT ATTTTGATGG GGCACGAGCC AAAAGACTTC GACGTGGCAA CCAACGCAAC GCCAGAGCAA ATTAAAGGCC TGTTTAAAAA CTGTCGCCTT ATTGGAAGAC GCTTTCGCTT GGCACATATC GTGTTTGGTC GAGAAATCAT TGAAGTGGCC ACATTTCGCG GGCACCATCA AGAGTCAGAT GAAGACGAAA ATGTACCTAA AGCGAAAGTC GTAGCGAAAC GGGACTCTCA CGGACAGCTC GTAAGGGATA ACGTATTTGG CTCGATAGAA GAAGATGCAG AACGCCGCGA CTTTACCTTC AATGCCATGT ACTACAGCGT GGCAGATTTT ACAGTAACAG ACTTTGCAAA CGGCTTAGCC GCTATAGAAA AGCGTGAAGT TGAGCTTATT GGCGATCCTG AAACCCGCTA CCGCGAAGAC CCGGTACGTA TGTTAAGGGC TGTACGCTTC GCCGTTAAGC TGGGTATGCG CATTGAAGAA AAAACCGCAG AACCCATCAA GCCTCTGGCT AACCTACTGC AAAACATTCC TCCCGCTCGC CTTTTCGAGG AAACGCTAAA GCTGTTTTTA TCTGGCAAAG GGGAAGTAAC CTTTTTGATG CTGCACGAGT ACGGACTAAT TGAGCCGCTA TTCCCACAGC TGGCGCCATT TTTAAAAGAC GAAAATAGCC GAGAAATGCA GTTTGTTCGC CGCGTGCTAG CTAATACCGA TGAGCGTATT AATAGTAATC AGCGTGTTAC GCCGGCATTT TTATACGCCG CTTTACTGTG GTATCCGGTT GAAGAACAGT CGCAGCATTT ACAAAGCGAA TCTGGCTTAA ATGCCCATGA TGCATTCAAT ATTGCGTCGG GCGAGGTTAT TTCCCGTCAA ACACAGCGTA TTATGATCCC TAAGCGCTTC TCCACCGTGG TGCGAGATAT CTGGATTTTA CAACAGCGTT TACCAAAACG TTTTGGACGC CGCGCTTTCC AACTGCTAAC ACATCCTAAA TTTAGAGCTG GCTATGACTT TTTACTAGTA AGAGGCCAGG TAGAAGGTGG CGACTTACTA GAGCTAGCGC AGTGGTGGAC GCACTTCCAA CACGCTGACA ACGGCAAGCA GAAGGGCATG TTAAACGCCC TTCGCAAAAG CGAAGGTGGC GCCAAAGGCG GCCCTCGCAA ACGCAAGCGT AAACCCGCTA AGCGAGGTCC CGATGCATAA
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Protein sequence | MTRGEHGISR EDISANALKV MYRLNGAGFE SYLVGGCVRD ILMGHEPKDF DVATNATPEQ IKGLFKNCRL IGRRFRLAHI VFGREIIEVA TFRGHHQESD EDENVPKAKV VAKRDSHGQL VRDNVFGSIE EDAERRDFTF NAMYYSVADF TVTDFANGLA AIEKREVELI GDPETRYRED PVRMLRAVRF AVKLGMRIEE KTAEPIKPLA NLLQNIPPAR LFEETLKLFL SGKGEVTFLM LHEYGLIEPL FPQLAPFLKD ENSREMQFVR RVLANTDERI NSNQRVTPAF LYAALLWYPV EEQSQHLQSE SGLNAHDAFN IASGEVISRQ TQRIMIPKRF STVVRDIWIL QQRLPKRFGR RAFQLLTHPK FRAGYDFLLV RGQVEGGDLL ELAQWWTHFQ HADNGKQKGM LNALRKSEGG AKGGPRKRKR KPAKRGPDA
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