Gene MADE_03510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03510 
Symbol 
ID6777590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3790938 
End bp3793112 
Gene Length2175 bp 
Protein Length724 aa 
Translation table11 
GC content48% 
IMG OID642756958 
Producttoxin secretion ABC transporter, ATP-binding subunit/permease protein, putative 
Protein accessionYP_002127796 
Protein GI196158307 
COG category[V] Defense mechanisms 
COG ID[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATGA GTATGACAAT GCCCCACGTT AGCCACACCC TGACCACTAA AAAACGCGTG 
CCTGTCATCT TACAAAGTGA GGCGGCTGAG TGCGGACTTG CCTGTATGGC TATGATTGCC
CAGTACTATA GAGATAAACG GGATCTCAAC GCCCTACGCC AATCTATGTC AGTGTCGTTG
CGTGGCACCA CATTAAAAGA TGTAATGAAA ATTGCGAGTG ATATGGGCTT TCAAACCCGG
GCAATAAAGA TAGAGCTTTC CCATATCACG CAACTTACCT GCCCTGCCAT CTTACATTGG
AATATGAACC ACTTTGTTGT GCTGACGAAA GTGAAAGGTG ACCGTATCAC AATACATGAC
CCGGCACTTG GCGAAAGAAG GCTGTCCTAC AAAGAAGCGT CTAAATGCAT TACCGGCATT
GCGCTTGAGG TATCACCTAG CGACAGCTTT AGCCCAATCA AAGCTGGCCC GCGGCTTGGC
CTTACCCAGT TTTTCAAACG TACCACGGGG TTTAAACGCA ACCTTCTTAC TCTATTCGCC
TTATCCCTGG TGCTGCAGTT ATTCGCCCTC GCTGCGCCTT ATTACATGCA AACCGTGGTA
GACGATGTAC TTATCTACAA TAACAACGCC CTACTCAAAG CGCTCGCTAT TGGTTTTGCC
CTATTACTGA TACTAGAAAC CTTTACTAGC GGGGTAAGAA AGCTGGTTAT TTTGTCGGTG
TCATCGCGGC TTCAACTTCA AATGTCGGCG TCAGTATTCA AACATTTGCT GTCACTTCCT
CTCGACTACT TCGACAAGCG CCACATTGGC GACGTGGTAT CTCGATTTGG CTCACTGGCA
AGCATTAGAG AGTTTTTAAC CACCGGCGTG GTAACAGCTT TACTAGATGG GCTAATGGCC
GTCGTCACCT TAGCGGTAAT GATGGTTTAT TCGGTGAAGC TCTCCCTCGT CGTAGTGGCA
ATCATGGCCA CATATTTAGC CATTCGCTTA GGGCTACTCC CCCTTATTAA ACGCCTTACC
ACAGAGCGCA TTGCCCTTGC AGCGTCCGAA CAAAGTCACT TCATGGAAAG CGTGCGGGCT
ATTTTACCAA TTCGGGTTTA CGGGCAAGAG ACACAGCGTC ACGGACAATG GCAAAACAAA
CTCGTGGCCA CTTTAAACAA AGACATAACA CTGGGTAAAA TCAATATTGG CAGCACGCTG
ACTAATCAGT TCCTGTTTGG CGCAGAAAAC CTCATTGTAG TGTATATCGG GGCTAGCTTA
GTCATGGAAA GCACCCTTTC CATTGGTATG CTGCTGGCTT TTATCGCCTA TAAATCACGT
TTTGTTAGCG CACTAGATGG TGTGGTTAAT AAGTTGGTAG AGCTCAATAT GCTGGGCGTT
CACTTTTCTC GTCTTAGCGA TATTGTACTC ACGCCGGTAC AAGTAAAACC TCATCGTTAC
CAAAATGCTG ACCTACCCTA TTACGCGAAT CAATCTCTAC CTAATAATAC GGCCATCGCC
CTTGAAACTA AATCGCTGGG ATACCGATAC AGTGAATCTA GCGAGTGGAT CTTTAAGGAC
CTCGCACTCA CCGTCAAATC AGGTGATATT GTAGCAATTG TTGGTGAGAG CGGAAGCGGC
AAAAGTACCC TGCTTAAATG CCTAATGGGG CTTTACCCGG TATCAGAAGG CAAAGTTGAA
CGCCCCAGCG TTAAGCAGCC TGTTGTCGCA TCGGTCTTGC AAGACGATGC CTGCTTAAGC
GGTACCATAG CGCAGAACAT TTGCTGTTTT GAGCAAGCGC CAGACCTACA AAAAATGGTT
CACGTCGCAC ATATCGCCTG CATTCATGAA GATATCATGC ATATGCCTAT GCAATACCAC
ACCTTAGTAG GCGATATGGG AAGCAGTTTA AGCGGTGGCC AAAAACAGCG ACTGCTTCTC
GCCCGAGCCC TTTATCAAGA GCCCGATATT CTGTTTCTAG ATGAAGCGAG CAGCCACCTG
GATATGGCCA ACGAGGCTCG CATTAACCAG CATCTAACAT CACTCAATAT GACCCGAATT
ATTGTGGCCC ATCGCCCACA GTCAATTGCT ATGGCAGATA AAGTTTACCG CTTGGCAAAC
GGGACACTAC ACCCCTGCTC TCCTACCGAA GTATCAGGAA GCGCAATATC AGGTAACCAC
GGAGAAACAC GATGA
 
Protein sequence
MMMSMTMPHV SHTLTTKKRV PVILQSEAAE CGLACMAMIA QYYRDKRDLN ALRQSMSVSL 
RGTTLKDVMK IASDMGFQTR AIKIELSHIT QLTCPAILHW NMNHFVVLTK VKGDRITIHD
PALGERRLSY KEASKCITGI ALEVSPSDSF SPIKAGPRLG LTQFFKRTTG FKRNLLTLFA
LSLVLQLFAL AAPYYMQTVV DDVLIYNNNA LLKALAIGFA LLLILETFTS GVRKLVILSV
SSRLQLQMSA SVFKHLLSLP LDYFDKRHIG DVVSRFGSLA SIREFLTTGV VTALLDGLMA
VVTLAVMMVY SVKLSLVVVA IMATYLAIRL GLLPLIKRLT TERIALAASE QSHFMESVRA
ILPIRVYGQE TQRHGQWQNK LVATLNKDIT LGKINIGSTL TNQFLFGAEN LIVVYIGASL
VMESTLSIGM LLAFIAYKSR FVSALDGVVN KLVELNMLGV HFSRLSDIVL TPVQVKPHRY
QNADLPYYAN QSLPNNTAIA LETKSLGYRY SESSEWIFKD LALTVKSGDI VAIVGESGSG
KSTLLKCLMG LYPVSEGKVE RPSVKQPVVA SVLQDDACLS GTIAQNICCF EQAPDLQKMV
HVAHIACIHE DIMHMPMQYH TLVGDMGSSL SGGQKQRLLL ARALYQEPDI LFLDEASSHL
DMANEARINQ HLTSLNMTRI IVAHRPQSIA MADKVYRLAN GTLHPCSPTE VSGSAISGNH
GETR