Gene MADE_03473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03473 
Symbol 
ID6777195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp3745265 
End bp3745909 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content47% 
IMG OID642756921 
Productsodium-type flagellar motor component 
Protein accessionYP_002127759 
Protein GI196158270 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGTA TTCTATCTAC CGCTTTATTT ATCTGTGTTT CGGTAACGGG GTTCTCTGCT 
CACGCTCTTG AGGGGGAAAC CGTAGAAGAG CTGCGTGCAG TTCAGCTATA CAGCCAAGAC 
GCGTTAATTG ACATGATTAA CGCTAATACG CATCTAGACA AGGTGGTGGC TGACAGGTGC 
CAGCTAGTAC AAGATATTGA AGCGCGAGCA GACGTACTTA AAATTCCGGC GTACCAATTT 
TTATGGGGCG ACATGTTGGC TTGGGGTGTG TGTGTTGATG CGGCGCCGTC GCGAGGCATT 
GGTTATATGG AAGATGCTGC GAACCAAGGT TTGCCCGCCG CCCTTGAACA ACTGGGGCGT 
TATTACGCAA AAGGCACGTT GGTACAACAA GATAAGTCTC GCGCCGTGGT GTATTTACGC 
GAAGCCGCTG CACTTAAAAA CCTAAAAGCG CAAATTCGAT TGGTTGAGTT GTTTTTAGAA 
GGTTACGGTA GCCCCTACGA TTACGAAGAT GCGTATCACT GGCTTTATAA CTCGGTCACA 
AACGATAAAA AACAGCATCA AAAAATTTCA TCTTATCTAG CGCGTTTAGA AAAGCTAATG 
CACCCGAAAG CGGTGCGTCA AGCTAAGCGC CCAATGGATA GTTAG
 
Protein sequence
MKRILSTALF ICVSVTGFSA HALEGETVEE LRAVQLYSQD ALIDMINANT HLDKVVADRC 
QLVQDIEARA DVLKIPAYQF LWGDMLAWGV CVDAAPSRGI GYMEDAANQG LPAALEQLGR 
YYAKGTLVQQ DKSRAVVYLR EAAALKNLKA QIRLVELFLE GYGSPYDYED AYHWLYNSVT 
NDKKQHQKIS SYLARLEKLM HPKAVRQAKR PMDS