Gene MADE_03439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03439 
Symbol 
ID6778786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3710240 
End bp3711541 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content45% 
IMG OID642756887 
Productphosphate regulon sensor protein PhoR 
Protein accessionYP_002127725 
Protein GI196158236 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR02966] phosphate regulon sensor kinase PhoR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.350506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTACC CTTTCTCTTG GTTGAGAAGT ACACTGCGAT TAGTGCTATT CCTTGTGGTT 
TTTGCGCTGG TGGGGTGGTA TTTGGATGAC ATGTTGTTCG CAGTAGCGAT AGGTGCAACC
CTGCTCTTAT TGTTTAATTA TTGGCACCTT TATAAACTTA ACCGTTGGCT ATGGCATAGC
CGTAAGATGT CTCCACCTAC TGTGCGTGGC GTGTGGGAGC ATATCTATGA AGGCATTTAC
TATCTTCAGC GCCGTAACCG CAATAAACGC AAGGAATTGG GCGAATTGGT TAAGCGCTTC
AGAGAAGGTT CTGAAGCCCT GCCAGATGCC GCTGTGGTAG TTGATGCTAA GGCGTGTATT
ATTTGGTGTA ACCGCCTAGC GCGACTAGAT TTAGGGCTTA AGTGGCCACA GGATTCAGGC
CGTCGAATAG ACAACTTGCT GCGACATCCT GAGTTTATAC AGTACTTTCA TGCAGGTAAC
TATAAATACC CCATTGAAGT ACCGTCGCCA ACTAATCCGA ATAAAACCTT TGAATATCGC
ATCATGCCCT ACGGGGAAGA GCACTTGCTG CTTATTGCCC GTGATATAAC ACGGGTTTCT
CAACTTGAAG AAATGCGCAA AGATTTTGTG GCCAATGTAT CTCATGAGCT TCGCACGCCG
CTAACGGTGA TTAATGGATA TTTGGAAATT CTTCCTGTAG ATGAAGAATC AGACCCGTTT
ATGCATAAAG CGATGAAGGA AATGACATCG CAAACCCATC GCATGCAAAA CCTGATAGAA
GATTTGCTGG TATTGTCACG CATTGAGGCA AGTTCAGAAC GCATTTACGA AAACGTGGTC
AATATTCCTA CAGTGCTAGC CCAAGTGGAA AGAGAAGCAC AGGCGCTCAA TAAAGAAAAG
AACCACAAAA TAAACTTTCA TATTGATGAA GAGCTTTATG TATTTGGCGT AGAAACCGAA
CTTAGAAGTG CTTGCTCAAA CTTGGTGTTC AATGCGGTGC ACTACACACC TGCCGGTGGT
GAAATTAATG TGTACTGGCG ACGTAAACCC AATGGCGCGC AATTTTCTGT GGTAGATAAC
GGTGATGGTA TTGAGCCAAA TCATCTAAAC CGCCTTACCG AGCGCTTTTA TCGCGTGGAT
AAAGCGCGCT CTCGCAAAAC CGGCGGATCG GGGCTGGGCC TATCCATTGT AAAACACGTG
CTAAGTCATC ATAATTCTCG CCTAGAGATT ACGAGTACAC TTGGCGAGGG CAGTAACTTC
TCGTTTGTAT TAGATAAAGA ACTTATTGCT GAGCAGCTGT AG
 
Protein sequence
MYYPFSWLRS TLRLVLFLVV FALVGWYLDD MLFAVAIGAT LLLLFNYWHL YKLNRWLWHS 
RKMSPPTVRG VWEHIYEGIY YLQRRNRNKR KELGELVKRF REGSEALPDA AVVVDAKACI
IWCNRLARLD LGLKWPQDSG RRIDNLLRHP EFIQYFHAGN YKYPIEVPSP TNPNKTFEYR
IMPYGEEHLL LIARDITRVS QLEEMRKDFV ANVSHELRTP LTVINGYLEI LPVDEESDPF
MHKAMKEMTS QTHRMQNLIE DLLVLSRIEA SSERIYENVV NIPTVLAQVE REAQALNKEK
NHKINFHIDE ELYVFGVETE LRSACSNLVF NAVHYTPAGG EINVYWRRKP NGAQFSVVDN
GDGIEPNHLN RLTERFYRVD KARSRKTGGS GLGLSIVKHV LSHHNSRLEI TSTLGEGSNF
SFVLDKELIA EQL