| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03428 |
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| Symbol | |
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| ID | 6776826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | + |
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| Start bp | 3693947 |
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| End bp | 3696835 |
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| Gene Length | 2889 bp |
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| Protein Length | 962 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 642756876 |
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| Product | PAS signal transduction protein |
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| Protein accession | YP_002127714 |
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| Protein GI | 196158225 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCTA TGCTACTGCA GCGACAAGCC ATGGACAAAC ATGGCATGGT CGTCACCATG
GATGTAAAAG GTAAAATTCT TAGCGCTAAT GAAAAGTGTA GCGAACTTTC AGGGTTTGCA
GAACATGAAA TTGTTGGTAA ATACATTACA GCCTTCGATA TTACTAACAT TTCAAATTCA
GATATAAGCG CAATTTTTAG CGCTCTTGCC TTAGGGAATA TTTGGCAAGG CGAAGTACAC
AGCTTAAGAA AAACGGGCGA ACCTTGGTTT GTGTTTGCCA CCGTCGTACC TGTTGTAAAG
AAAGCCCCTC TTGTCGATCA CCTTATCGTA ATCGCTACCG ACATTTCCCA GCAAAAGCGT
TTAGAGAAAA GCTTATCTGA AGGACGAGCA TTTTACCGCA GCATCACCGA TAGCATCGGC
GAAGGGGTTT ACGCCGTAAA CGCAGAGGGC AAGACCCAGT TTCTCAACCC GGCCGCTTCT
CGATTACTAG GTTGGACGTT AGAAGAACTT CAAGACCGCC GTTTTCACGA TACGGTTCAC
TATCAAAAAG GCGACGGCAC CCTTCTTAAA AGAGAGCAAT GCCCCGTTAA TCTCACTATA
CGCGACGGGA AATCATATAC TTCCTACGAA GATTTTTTTA CCGACAAACG AGGGAGACTG
TTTCCCATCT CCATTGTAGC AGTACCACTA CTTAACAACG AAGGTAAACC CGATGGGCAC
GTAGGTGTTT TCAACGATAT AAGCAGTCAA AAAGCGATTG AGCATAAGCT ACAGAAGGCG
TATGACGAAG CACAAAGTGC GAATAAAGCG AAAACTGATT TTCTCGCTAC CATGAGTCAC
GAGATCAGAA CACCGATGAA CGCAATAATC GGTCTAACGC ACTTGGCGTT AGAGACTCAG
GATAACGACC AACGCCAGCA ATATTTAGAA AAAGTCCAGA AAAGCTCTAA CGCGCTGCTT
GAGTTAATGA ATAGCATCTT GGATTTCTCC AAAGTTGAAG CCAATAAAAT AGACATTCTT
GACGAGCCTT TCACTCTTAC GAAAACCATA GATAAACTGG CTCAAGTATT TCAGGTAAAG
GCACAACAAA AGCAGCTTCA GCTTCTTTTC GATATTCGAT GCAGTACCAA GATACGGTGC
AGTGGTGATA GCGAGAAAAT CTACCAAGTT TTGCTCAACC TTTTGAGTAA CGCCATCAAG
TTCACAGAAA CAGGCCATGT TTTGCTTAAA ATTGATAAGC GTGGTAACGA GCTCGGTTTT
AGCGTAAGCG ATACCGGCAT GGGCATTAGC GATACAGGTA AAACCAAATT ATTCAATGCT
TTTGAACAAG CAGACGCATC AATCTCGAGA AAGTTTGGCG GTACAGGGTT AGGACTTGCT
ATTTGTAAAC GACTCGTTGA GCTAATGGGT GGCGAACTAA CCATTGAAAG TAAGGTTAAC
GAAGGGACTA ATTTTGCATT TTCACTGCCA ATTTGTATTG AAGACACTGA ACCAAGCGAC
TCTCTTCTTC CTGTGTCCAT CCCTTCTGAA GTACTTTGTA TTCAAACACA TAAAAGCGTA
GAACAAGGCT GTCAAATCCT TTGTCAAACG TTACAAAGGT TCAATATTCA CTGCCTCATA
GCTGACCCAA ATGAGAACCT TCTACCTAAA CAAGCAGACT TTAGCATTGT TTTTTTACCT
GTCGATGAGT CCAGCTGGAA AAGCTTTTTA CGTCATGTCC AGTTTGGTGA ATACCACGAG
CTAAACTGCA ATGTGCTAAT AAGTCCGTTT AGCAAAGAAG AAGTGCAAAA GCGAATCGGA
ACATCCCTCT CTAAAAATAT TCGGATTATC GAGCTTCCCT TCACGGAAGG TGAACTTATT
TCCGCTTTGT CTCCGCTGCA TGCGTCGACG AACAAAAAAA CGAGTGAAGG GCTGGAAAGT
AAAAAGTGGC GAACTAAGCG CCTATTGAAT AAGCGCGTGT TAGTGGTCGA TGACGACTTA
ATTAGCGTTG AAATAAGTCA GCAGATACTG AAAGATTTAG GCGTCAACGT GGTAACGGCG
ATGACTGGCG AGCTGGCGTT AGCGCTCTGC AAATCGAATA CATTTGACGC TATATTGCTG
GACTGCCACC TTCCAGGCAT AACAGGTTAT GACATCGCTG AAACGCTTAC ACATAAAGAA
GGGTGTTATA CCCCAATCAT TGCGTTGAGC GCGGATGAAA CGAATGAAGC GTCTGAAAAA
GCGTTATCTG CCGGCATGTG TCATCACTTA GTAAAGCCCG CAACCGCAGA CGAGATTGTA
CACACAATCG ATATTCACAT ACACGCCGGA TACATGGAAA TTACCCCGCC AAGCGAGACA
GACGCATTTA TCGCCTCACT GCTGTCTTTT TACGATACTT ATAGCCAGCG TAGCGTAATG
TCTAATTTAC TCAATATTTT TCACGAACCG ACACACACCA GTCAGCTATT AACCGAATTA
CTTGCTGACG CCCAGAAAAT AGGAGCAACA ACATTAGAAC GGTGTTTACA TCGTTTTATG
GAGGCGAAGC AGAGGCCTGA TACTATCAAC GCAAAGCACA TTTCAGACAT CTCCTTCGAG
CTAGATGCAA CACTTCGCTT AATTGCTCAT ACTATTGATA AAAGTGACGT GGGCAATGAG
TGTAATGAAA ACAGCGATGT GGACAATGCA TCACTACGCT CTTCTTTAAA AGAGGTAAAA
CAGGCCCTTG AAGCCTACGA TGCTAGGGCA CTTGAGTTAA TAACAGCGCT TGCAGCTCGC
CACTTCGGGC TGGGTCATTC ACATACGTTG AATCAATTGA AAAAGCTTGC CTCTATATAT
GATTTTGAAG GGGCTTTGGT CGTAGCGCAA TCACTGATAG ATGAAATTAA TAATGACCGA
ACAGAATAA
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| Protein sequence | MNAMLLQRQA MDKHGMVVTM DVKGKILSAN EKCSELSGFA EHEIVGKYIT AFDITNISNS
DISAIFSALA LGNIWQGEVH SLRKTGEPWF VFATVVPVVK KAPLVDHLIV IATDISQQKR
LEKSLSEGRA FYRSITDSIG EGVYAVNAEG KTQFLNPAAS RLLGWTLEEL QDRRFHDTVH
YQKGDGTLLK REQCPVNLTI RDGKSYTSYE DFFTDKRGRL FPISIVAVPL LNNEGKPDGH
VGVFNDISSQ KAIEHKLQKA YDEAQSANKA KTDFLATMSH EIRTPMNAII GLTHLALETQ
DNDQRQQYLE KVQKSSNALL ELMNSILDFS KVEANKIDIL DEPFTLTKTI DKLAQVFQVK
AQQKQLQLLF DIRCSTKIRC SGDSEKIYQV LLNLLSNAIK FTETGHVLLK IDKRGNELGF
SVSDTGMGIS DTGKTKLFNA FEQADASISR KFGGTGLGLA ICKRLVELMG GELTIESKVN
EGTNFAFSLP ICIEDTEPSD SLLPVSIPSE VLCIQTHKSV EQGCQILCQT LQRFNIHCLI
ADPNENLLPK QADFSIVFLP VDESSWKSFL RHVQFGEYHE LNCNVLISPF SKEEVQKRIG
TSLSKNIRII ELPFTEGELI SALSPLHAST NKKTSEGLES KKWRTKRLLN KRVLVVDDDL
ISVEISQQIL KDLGVNVVTA MTGELALALC KSNTFDAILL DCHLPGITGY DIAETLTHKE
GCYTPIIALS ADETNEASEK ALSAGMCHHL VKPATADEIV HTIDIHIHAG YMEITPPSET
DAFIASLLSF YDTYSQRSVM SNLLNIFHEP THTSQLLTEL LADAQKIGAT TLERCLHRFM
EAKQRPDTIN AKHISDISFE LDATLRLIAH TIDKSDVGNE CNENSDVDNA SLRSSLKEVK
QALEAYDARA LELITALAAR HFGLGHSHTL NQLKKLASIY DFEGALVVAQ SLIDEINNDR
TE
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