| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03378 |
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| Symbol | |
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| ID | 6778772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3636884 |
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| End bp | 3639280 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642756826 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_002127664 |
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| Protein GI | 196158175 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0156374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCTCAGG ACAACGCTCA AGCTGATACA CAAGACGCGG CAGAAACAAA GAAAGACTAT
GAAAAAATCG TAGTTACGGG TACGAGCCGA GCGCGATTGG TGGCTGAAAC GCCACAATCG
ACTACGTCTA TGGGGGCGCA GGAGGTAGCA AAATTATCCA TGAGTAGCCA AGCAGACGTG
CTTCGTTATG TTCCTGGTAT TAAAGTAGAA GGTGGCGGTG GTGAAGTGGC CACAAATCTC
CAAGTCCGTG GGTTACCATC TTCAGGGCAG TTTCAGTTCA CCCCACTTTT GTACGACGGT
TCACCCACTT TGAGTGCGTT TGGTCTTAAC TCGTCGGCTT ACGATGTGTA TTACCGAAAC
GATCTAGGTA TTGAGCGGGT TGAGTTTGTT CGCGGCGGTG TATCTAACTT ATTCGGGCAA
GGTTCGGTGG CGGGCGTTAT CAACTACCTA TCGAAGAAAG GCACGGAACT ATCGGAAAGT
ACGGTGCAAT TAGAGCTTTC TGATAACAAC CGCAAGCGTA TAGATTTTGC CACCAGCGGC
CCACTGAATG AAAAAGGCAT GTACTATGCC ATGTCCGGTT TTTATCGTTA CGATGAAGGC
CCAATTGATA CAGGGTTGCC TACGGAAGGT TATCAACTGC GAGGCAACAT TCACAAAGAA
TTCGACGATG GCAGTGGCTA CTTTACTATA TACGGCCAAG CTATTGATGA TGAGGTACAA
TTTTTCCTTC CATTGCCTCT TGATTCACAA AGCCGAGAGC GTGTTGCCGG CAACGATGGC
AGAGAAGTTG AATCTACCCA AACATTTTAT GCATCTGGCT TGTCTTATGA CACCGCAGAT
GGGCGTTATC GCACGCCTAT TGAAGAGGGG GTAGCCACTC GTGGAGGCTC TATTTCCATG
GAGTTCTCAA AGGATTTAGG TAATGACTAC AGTGTTTTAG CACGAGCAAA GTACGCCAGT
TACGACCACC AATTTAACTT GTTTCTAGAC GGTGACGGTA TTATCAATGT GCCAGAAACA
CAAAGCGAAT ATTTAGCGAA CAGAGGGCTC GACGACCTTG GCGCCGCTGA ATTTACCTAT
GCGGGAACGG ACGTAGTATT ACCTGAAGGC GATTTACTAT TTGCTAACCG AATACTAGAC
AGAGACCGGC CGGCAACCGA TTTTTCTTCA GAGCTTAATG TCGTCAAATA CCTGGATGTG
GGGGATTTCT CTCATAGCAT TACCGTGGGC ACCTTCTTTT CAAGCGCCGA AGCAGAAGAT
AATAATGTAA TAACCCGCTA CCTCGGCGAA TTTAATAATC AGGCCAGATT GGTTGATCTA
ACCATTACTG ACGCCGATGA TAACAGTGTC ATAGTTAGCC AAAACGGCGT GACAGGCCCG
GGTATTAGTT TTTCTGATAC GACTATTTCT GCAAGAAGAA CGGCATTCTA TATAGCTGAC
CAAATGCAAA ACGACGACTG GATCATTGAC GTGGGTCTTC GCTGGGAGGA AATCGACGGT
ACCATTACCC GTGAGGGCAG CGAAACTGTG GTAGTTAATG ACGACCCTAT ACTGTACGAA
GACTTACAGG TGAATGTCAC AGGGAACGGT GTGCTTACTC ACGGTAAAGT CGATAACTCA
GAATTAGCTT ATTCAATTGC AGCCCTCTAT AAAATGGCCG ATAACTTTAA TGTTTATGCC
AACTATTCTC GCGGGTTCTT TTTCCCCGAG TTGCGCGGTG TGGCGTTTAA CCCTAATGGT
GAGCCGGGCA GTTATGAAAG TGAAATTGTT AAGCAGGCTG AAATAGGCGC GAAGTTCTTC
TTTAATGACT TCATTGGAAC CATGGCTTTG TTCAAAACCG ATCTTGAAGA CAGACGTTCG
GTAGACTTTG TGAACGACGA AAATGGGGTT GCTGTTGAAG TTCCTGTTTT TCAATCTACC
GAGGCCTATG GCGTGGAGTT GGTGGGTAGC TACAACATTA CTGATGACCT TATCTTTGAT
GCAAACTTTA CTTACACCGA CCACGAATTC ACCGAATACG ATTCAGATCC TTCTGTTATC
GGTAATGAAT TGAGAAGAAA GCCAAAGATT ATGTTTAATT CTTCTTTACG CTACACCCTA
GACGATTGGG ATATTTCTTT CTATCACAAC TATCACGGTA AAAATTACAC CAACGATGCT
AATTCGGTTG AATTGGATGA CTTTCATGTA TTTCGCTTAG ACACAGGCTA TACCTGGGAG
TTTGGACAAG GCGAACGCTT ACGTGCCAGT ATTGCCGTAT GGAATCTGTT CGATTCAGAT
GGTATTACTG AAGGGTCTCC TCGACTAGGA AACAGTCAAA CAGCGGGTGA ATCTTATTTT
GTAGGTCGCC CTATATTGCC GCGCCGCGTA TCGCTTCGCT TGCGTTATGA TTTTTAG
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| Protein sequence | MAQDNAQADT QDAAETKKDY EKIVVTGTSR ARLVAETPQS TTSMGAQEVA KLSMSSQADV
LRYVPGIKVE GGGGEVATNL QVRGLPSSGQ FQFTPLLYDG SPTLSAFGLN SSAYDVYYRN
DLGIERVEFV RGGVSNLFGQ GSVAGVINYL SKKGTELSES TVQLELSDNN RKRIDFATSG
PLNEKGMYYA MSGFYRYDEG PIDTGLPTEG YQLRGNIHKE FDDGSGYFTI YGQAIDDEVQ
FFLPLPLDSQ SRERVAGNDG REVESTQTFY ASGLSYDTAD GRYRTPIEEG VATRGGSISM
EFSKDLGNDY SVLARAKYAS YDHQFNLFLD GDGIINVPET QSEYLANRGL DDLGAAEFTY
AGTDVVLPEG DLLFANRILD RDRPATDFSS ELNVVKYLDV GDFSHSITVG TFFSSAEAED
NNVITRYLGE FNNQARLVDL TITDADDNSV IVSQNGVTGP GISFSDTTIS ARRTAFYIAD
QMQNDDWIID VGLRWEEIDG TITREGSETV VVNDDPILYE DLQVNVTGNG VLTHGKVDNS
ELAYSIAALY KMADNFNVYA NYSRGFFFPE LRGVAFNPNG EPGSYESEIV KQAEIGAKFF
FNDFIGTMAL FKTDLEDRRS VDFVNDENGV AVEVPVFQST EAYGVELVGS YNITDDLIFD
ANFTYTDHEF TEYDSDPSVI GNELRRKPKI MFNSSLRYTL DDWDISFYHN YHGKNYTNDA
NSVELDDFHV FRLDTGYTWE FGQGERLRAS IAVWNLFDSD GITEGSPRLG NSQTAGESYF
VGRPILPRRV SLRLRYDF
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