Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03368 |
Symbol | |
ID | 6778653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3621261 |
End bp | 3623525 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642756816 |
Product | putative TonB-dependent receptor |
Protein accession | YP_002127654 |
Protein GI | 196158165 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00133491 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACCA ATACTGACGT GTCTAAGACA CTCGCCAGTA AGCTTTCACC TGTCGCACTA GCAGTAGCGA TGACCGTTCC AGCTCTTTCA AACATTGCGG TTGCTCAAGA AGCCGAAGCA ACAGAAGAAC AACAGTTTGA AGCCATTACC GTTACCGCAA CAAAACGCCC TCAAGTTATT TATGAAGTTC CTATCGCTAT CAGTGCTTTT GATGGTGACA AGCTAGCTGC CCAAGGTATT ACAGACCTAA CCGACGTTGG TAAGTTCGTT CCAAACCTTA ACGTTACGGG TTTCTCTGCG GGCCACACGT CTTCTGTAAA CCCTTTCATT CGTGGTATCG GTCTTCAAGA TCACCTTATC ACTACCGACC CTGGTGTTAG TGTTTACGTT GATGGCGTTT ACCTAGGCCG TCAAGTAGGT CAAAACTGGA GCTTAAACAA TATTGAGCGT ATTGAGGTAC TTCGTGGTCC TCAAGGTACC CTTTATGGTC GTAACTCAAT TGGTGGTGCA ATTAACATCA TTACTAAAGA GCCAGATCAA GGTGATGTAA CTAAAGTAAA CACCGAGTTC GGCACGCGCG GCCGTGTTAA AGCCGATATT TTTGTTAACC ATGGTCTATC TGAAACTGTT GCGTTTAACA TGAACCTAGC GTTCAACAAA CGCGACGGCC TTGGTGAGTT CATTAACGTA CCAAATGCTG AATACGATGT AGGTGAGACT GAAGATATTT CTGGTCGTGT ATCACTTAAG TGGGAGCCTT CAAACGATTT CCGCATGGTG CTAACCGCAG ATGCTAACAA CGGTGACGGT GGTTTACGTC CTTACACTGT GCTTATTGAT GAAGTGGGTT CTGCGCGCTA CTTTGGTGGT GGTAACGGCT TAGGTGTTGA GTTGCGTAAT ACTGACGTAA CGCCTGAAGG TGCAGACATT TATGATAACG CAACAGGTAC TGAAGCAGTC ACTGGCGTGT CTAATGAAGC GCGCGGCCTT TCACTAACGA CTGAGTGGGA TATCAATGAC GACTATACGG CGAAGGTTGT TGCTAGCCAG CGTACATCTA AATATAAAGC AGGCCTTGAT GATGACGGTA CAGTATTCTC ACTAGACCAG TTCCCGGAGC GTGGCGAAGC AGACCAAACG TCAATCGAAC TTCAGCTTAA TGGTTATATT AACGAATATA CTGACTTCGT AACGGGCCTT TACTACTTCA ATGAAGAAGG GAGCAACCGC CAGGGCGATG ATTCTAACTT CGACGGCGGC CCAAACTTAC TTGAGCTAGA CCAAGAAACC ACGTCGAAAG CGGTATACGT GAACGTGCGT CATGACTTAA CTGATGAGCT AAGTGTGTCA GGTGGTATTC GTTACACCGA AGACGAGAAA GAAGCCTCTG CGAACGTATT CTCAGCACTT GGAACTATCT TCGACTCAAA CGAATGGGAT GAAGTAACCT GGGAGTTTGC TACTAACTAT ACTTTTGATA ATGGCATGAC AGGATATGCG ACTATTCAGT CGGGCTACCA GTCTGGTCAG TTCCCAGCGC GTCCTTACTG TCTAATCGGC CAGTTTTTCG GTGCGGGTGG CTTCGATGAT ATCGAAGGCG CACAAGCAGC CGTTCGCGCA AATAACTGCT TTACGGCATC TGACAACATT ACCGCTACTA ACTATGAAGT AGGTATTAAA GGTCGCGTTA ACGATTACTT CGATATCAGT GTTGCTGTCT TTAACACTGA GTTTGAAGAT CTGCCTTACC AAGTAAGTCG CGTAAGTGAA GGCGGTTTCG ACACAGCAAA CCTTGTTGTT GAACAAACTT CTCGTGGTAT TGAAGCAGAT GCAACGTTTA GCTATGGCAA CTTCAGCATG ATGACCAGCA TTGGTTACAT GGATGTTGAT GTGGAAGAGC AAGATGGATT TAACCCGGTA GCACCACTGA CTCCAGACCT TACGCTAGCA ATTGGTCCTC AGTACACCTT CGAACTCGAT GGTGGCGATT CAATTCGCGT GCGTGCTGAT TACTCTTACC GTTCAGAAAT GTACGGTGAG CCAACATCTG CACCAGAGCG TATGACAGAG CTTGATAGCC GAGCGTTAGT TAACTTTGAT ATTGCGTATA CGCCAGCGAA TGAAGCGTAC ACAGTCGCAC TTTACGGTCG CAACATTTTC GATGAGCGTT ACGACAACGC GCGCTTGAAT ACAGGTGACT ATATCCTGCA AATTCTAAGC AATGACGCGA GCGAGTTCGG TGTTAGATTC ACCACTGAAT TCTAA
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Protein sequence | MKTNTDVSKT LASKLSPVAL AVAMTVPALS NIAVAQEAEA TEEQQFEAIT VTATKRPQVI YEVPIAISAF DGDKLAAQGI TDLTDVGKFV PNLNVTGFSA GHTSSVNPFI RGIGLQDHLI TTDPGVSVYV DGVYLGRQVG QNWSLNNIER IEVLRGPQGT LYGRNSIGGA INIITKEPDQ GDVTKVNTEF GTRGRVKADI FVNHGLSETV AFNMNLAFNK RDGLGEFINV PNAEYDVGET EDISGRVSLK WEPSNDFRMV LTADANNGDG GLRPYTVLID EVGSARYFGG GNGLGVELRN TDVTPEGADI YDNATGTEAV TGVSNEARGL SLTTEWDIND DYTAKVVASQ RTSKYKAGLD DDGTVFSLDQ FPERGEADQT SIELQLNGYI NEYTDFVTGL YYFNEEGSNR QGDDSNFDGG PNLLELDQET TSKAVYVNVR HDLTDELSVS GGIRYTEDEK EASANVFSAL GTIFDSNEWD EVTWEFATNY TFDNGMTGYA TIQSGYQSGQ FPARPYCLIG QFFGAGGFDD IEGAQAAVRA NNCFTASDNI TATNYEVGIK GRVNDYFDIS VAVFNTEFED LPYQVSRVSE GGFDTANLVV EQTSRGIEAD ATFSYGNFSM MTSIGYMDVD VEEQDGFNPV APLTPDLTLA IGPQYTFELD GGDSIRVRAD YSYRSEMYGE PTSAPERMTE LDSRALVNFD IAYTPANEAY TVALYGRNIF DERYDNARLN TGDYILQILS NDASEFGVRF TTEF
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