Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03351 |
Symbol | |
ID | 6778697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3607104 |
End bp | 3608306 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642756799 |
Product | Carboxynorspermidine dehydrogenase |
Protein accession | YP_002127637 |
Protein GI | 196158148 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00142848 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCGCG TTTTAATTAT TGGTGCTGGC GGCGTTGCGT CGGTAACTGT GAAAAAATGT GCACGTTTAC CGCAGCATTT CGACGAAATT TACTTAGCCA GTCGCACAGT ATCTAAGTGT GAAGCACTTC AACAAGAAGT GGGTGCCGAC CGCGTAAAAG GCGTTTTCGC TGTTGATGCC GACAATGCAA AAGAAGTTGA AGCACTGATC AACGAAGTAA AACCAGACCT AGTAATCAAC CTTGCGTTGC CTTACCAAGA CCTTCCTATT ATGGACGCGT GTCTTGCGAC CAATACGCAT TACCTTGATA CTGCTAACTA CGAGCCTAAA GACGTAGCGA AATTCGAATA TTCGTGGCAG TGGGCTTACC AAGACAAATT CAAAGATGCA GGTATTATGG CGCTGCTAGG CAGCGGCTTT GATCCAGGCG TAACTAACGT TTACACGGCA TATGCAGCGA AGCACTACTT CGACGAAATC CACTACCTTG ATATCGTAGA CTGTAATGGC GGCGACCACG GTCAGGCTTT TGCGACTAAC TTCAATCCAG AGATCAACAT TCGTGAAATT ACCCAGCGCG GTCGTTTCTG GGAAAATGGC GAGTGGAAAG AAACCGATCC GCTAAGCGTT CGTGAAGATC TGGATTATCA GAACATTGGT GTTCGCGCAT CTTACCTAAT GTTCCACGAA GAGCTGGAAT CTATTGTTAA GCACTTCCCT ACCCTTAAGC GTGCACGCTT CTGGATGACA TTTGGCGATG CTTACTTAAA CCACCTGCGT GTACTTGAAG GCATTGGTAT GACGAGCATT GAGCCCGTGG AATTCCAAGG TCAACAGATT GTGCCGTTAG AGTTCTTAAA AGCGGTACTT CCTAACCCAG GTTCACTTGC TGAAGGCTAT AGCGGCATGA CGTGCATTGG CACCTACATC ACGGGTATTA AAGATGGCAA AGAAAAGACC ATCTTTATTT ATAACAACTG TGAGCATGCT AAGTGCAACG AAGAAGTAGG CGCACAAGCG GTGTCTTACA CCACGGGCGT ACCGGCCATG ATTGGCGCAG CACTTATGCT TAACGGTACT TGGAAAGAAG CCGGTGTTTG GAACATGGAG CAATTCGATC CAGACCCATT CATGGATATG CTTAACGAGC ACGGCCTACC ATGGCACGTA CTTGAGTGTG AAAGCAGCCC TTTCACCAAA TAA
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Protein sequence | MSRVLIIGAG GVASVTVKKC ARLPQHFDEI YLASRTVSKC EALQQEVGAD RVKGVFAVDA DNAKEVEALI NEVKPDLVIN LALPYQDLPI MDACLATNTH YLDTANYEPK DVAKFEYSWQ WAYQDKFKDA GIMALLGSGF DPGVTNVYTA YAAKHYFDEI HYLDIVDCNG GDHGQAFATN FNPEINIREI TQRGRFWENG EWKETDPLSV REDLDYQNIG VRASYLMFHE ELESIVKHFP TLKRARFWMT FGDAYLNHLR VLEGIGMTSI EPVEFQGQQI VPLEFLKAVL PNPGSLAEGY SGMTCIGTYI TGIKDGKEKT IFIYNNCEHA KCNEEVGAQA VSYTTGVPAM IGAALMLNGT WKEAGVWNME QFDPDPFMDM LNEHGLPWHV LECESSPFTK
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