Gene MADE_03325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03325 
Symbol 
ID6778637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp3580484 
End bp3581149 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content48% 
IMG OID642756773 
Producturacil-DNA glycosylase 
Protein accessionYP_002127611 
Protein GI196158122 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.100053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCAC TAACATGGCA AAGCGCGCTA GGTAACGAGA AACAAAAAGA GTACTTTGTT 
GAGTTACTTG AGCGCGTAAA GCAAGCGCGT GAAGCGGGTA GTGTTATTTA CCCGCCTCAG 
CCTGATGTAT TCAATGCGCT AAAATACACG CCGCTCGATA AAGTTAATGT GGTGATACTA 
GGGCAAGATC CTTATCACGG CCCTAATCAA GCCCACGGCC TTTGTTTTTC TGTTCAAGCA 
GGTGTGAAAA CGCCGCCGTC GCTTAAAAAC ATGTACAAGG AACTATTGAC CGATATCGAC 
GGCTTTGTCG AGCCTAATCA CGGTACGCTG ACGCCATGGG CAGAGCAAGG TGTGTTGTTA 
CTTAATACCG TACTTACCGT AGAGCAGGGC AAGGCACACA GCCATGCGAA GTGGGGGTGG 
GAAACCTTCA CCGACAAAGT TATCGATGTG GTAAATGCGA ACTGCGAGAA CGTGGTATTT 
CTTTTGTGGG GCAGTCATGC GCAAAAGAAG GGTAAGCATA TAGACCGCGA AAAACACAAA 
GTGTTACACG CACCGCACCC TTCGCCGCTT TCAGCCCATA GAGGCTTTCT AGGGTGTAAG 
CATTTTAGCC AAACCAACGA ATACCTTGTT GAGAAAGGCA AAACCCCAAT CAACTGGCAG 
GTGTAA
 
Protein sequence
MTSLTWQSAL GNEKQKEYFV ELLERVKQAR EAGSVIYPPQ PDVFNALKYT PLDKVNVVIL 
GQDPYHGPNQ AHGLCFSVQA GVKTPPSLKN MYKELLTDID GFVEPNHGTL TPWAEQGVLL 
LNTVLTVEQG KAHSHAKWGW ETFTDKVIDV VNANCENVVF LLWGSHAQKK GKHIDREKHK 
VLHAPHPSPL SAHRGFLGCK HFSQTNEYLV EKGKTPINWQ V