| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03263 |
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| Symbol | |
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| ID | 6777025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3524987 |
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| End bp | 3526534 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642756713 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase |
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| Protein accession | YP_002127551 |
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| Protein GI | 196158062 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.585417 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAGTTA GTGCCTTTAT TCAAAGTACC AAAGCATTGC TGGCGAAGTT TGGTGTAGAC
GCACCGGATA TACGTATTGA AGGCCTTACT TTAGATAGCC GCGAAGTGAA CACGCGGTTA
GCTTTTTTAG CCATTAAAGG GCATGAGCGC GACGGCCGTG ATTTTATCCC TCAGGCAATA
AGTTTAGGGG CCCGTGTAAT TCTGGCGCAA ACTGACGACA GTGAAGCTCA TGGCCAAATG
GAAATGCGCG ACCACAGCGT TATCATTTCT CTTTATGAGC TACCCCAAAT GCTCTCTGCA
TTAGCTGCAG CCTTTTATGA CTATCCCGCA CAAAAGATGA CAACGGTAGC GGTTACTGGA
ACTAACGGAA AAACCTCTAC AGTTCAATTG CTTACGCAAC TTAAAGACGC GTTAGGTACG
CGTAGTGCAA GCATAGGTAC CCTAGGTAGC AGTGTGTTTG AAGGCGATGC GACGCAATGG
TCGAACACGC CTGCGGCCAA TACCACGCCA GATGCCATAC GTATGCAGTA CTTGTTGGCA
GACTTTGTGC AAAGCGAAGT GCGCCATGCC GCCTTTGAGG CCAGTTCTCA CGCGTTGGTT
CAGGGGCGAC TTGGTACGGT TAAAACCGAT ATAGCTGTTT TCACCAACCT TACACGGGAT
CATCTCGATT ATCACGGCAC GATGGAGGAA TACGGTAAGG CTAAGCGCTT ACTGCTTTGT
CAGCCTGGGT TAAAAGCGGT GGTGTTAAAC GCTAACGATG ATGAAAGTAA TAAATGGGAC
AATGTTGCTG ACAATGCTAT TACCCGCATT TGGACGGGTA TTGATGAAAG TGCTGATGGT
GCGTTATTTC GCGCCCACAA CAATCCTCAA AGTCGCCATT GTTTCGCCAC AAATGCTTCT
TATCATTCCG GTGGATGTAG CTTTGAACTG GTGAGCTCGT GGGGAAGTGC CGCCATTTCC
CTACCGCTTT TCGGTAAATT CAATATTAGT AATGTGCTAA GCGCAATAGG AACACTTCTG
GCAGAAGGTG AGCGTTTTGA CGCGGTGGTA AAAGCGGTTA ATGCGATCAC CCCTGTGCCA
GGGCGAATGG AAGTGTTTCC AGTACCCGGT GCTGCCAATT TGGTGGTGGA CTACGCCCAC
ACCCCTGACG CACTGGAAAA GGTGCTGCTA AGCGCCAAGT TTCATACCGC TGGAAAAGTG
TGGTGTGTAT TTGGTTGTGG CGGTGATAGA GACACAGGAA AGCGCCCATT AATGGGGCAG
GCTGCTGAAG CTGGCGCTGA TGCCATTGTT ATCACCACTG ATAACAGCCG TAGCGAAGAC
CCTGAATCTA TCGCGCAGGA CATTATTACC GGTTTAAAAG ACAGTAGCCT TGCGGTGTCA
ATTCCTGACA GAGAGCAAGC TATTCGTCAT TGCCTAGCGC ATGCTGATAA AAGCGACATC
ATCATTGTGG CCGGAAAAGG CCATGAAGAT TACCAAATTA TCGGTGACAA AAAGACTAAC
TATAACGAAC GTGCGGTTGT GGCGCGGCTG CAACAGGAGT ACAGCTAA
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| Protein sequence | MVVSAFIQST KALLAKFGVD APDIRIEGLT LDSREVNTRL AFLAIKGHER DGRDFIPQAI
SLGARVILAQ TDDSEAHGQM EMRDHSVIIS LYELPQMLSA LAAAFYDYPA QKMTTVAVTG
TNGKTSTVQL LTQLKDALGT RSASIGTLGS SVFEGDATQW SNTPAANTTP DAIRMQYLLA
DFVQSEVRHA AFEASSHALV QGRLGTVKTD IAVFTNLTRD HLDYHGTMEE YGKAKRLLLC
QPGLKAVVLN ANDDESNKWD NVADNAITRI WTGIDESADG ALFRAHNNPQ SRHCFATNAS
YHSGGCSFEL VSSWGSAAIS LPLFGKFNIS NVLSAIGTLL AEGERFDAVV KAVNAITPVP
GRMEVFPVPG AANLVVDYAH TPDALEKVLL SAKFHTAGKV WCVFGCGGDR DTGKRPLMGQ
AAEAGADAIV ITTDNSRSED PESIAQDIIT GLKDSSLAVS IPDREQAIRH CLAHADKSDI
IIVAGKGHED YQIIGDKKTN YNERAVVARL QQEYS
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