Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03258 |
Symbol | |
ID | 6777097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3518545 |
End bp | 3519639 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642756708 |
Product | UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine |
Protein accession | YP_002127546 |
Protein GI | 196158057 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase |
TIGRFAM ID | [TIGR01133] undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAAGC GTTGCTTAAT TATGGCTGGG GGTACAGGCG GCCATGTTTT CCCAGGTCTT GCCGTCGCCA ATGCGCTTCG AGCGGAAGGC TGGGATATTC ATTGGCTAGG CACCGCCGAG CGAATGGAAG CGCAAGTGGT GCCTAAACAC GATATTCCCA TTCACTTTAT CCCTGTGAAG GGGCTGCGAG GCAAGGGCAT TTCAGCGCGT ATCCAAGGTG CAGTGGCATT GGTTAAAAGC TTGTTTTCAG CGCGTCGAAT CATAAAGCGG CTACAGCCTG ATATTGTTGT TGGGTTTGGC GGCTATGCCA GTGGGCCGGG CGGCGTTGCG GCCAAGAGTT TAGGGATCCC TGTCATTGTT CACGAGCAAA ATGCTGCGGC AGGTATGACC AATAAGCTGC TGAGCAAACT CGCAAGTCGC GTGCTTCTTG GCTTTGATGA TGCTAAAGAA CAATTTTCAG GCGCCGCGGA TAACGTGCAT ACTGTGGGTA ACCCCGTTCG CGATGACATC TGGCAGGTTA AACCCAAAAA GCGAGAGTCA TACGCAGGGG CTACATCCCT TAATATGCTC GTGGTCGGTG GAAGTTTAGG GGCACAAATT TTAAATGAAA CCGTGCCGGA AACCTGCGGC GTACTAAATG GTCTATCTAT AAAGCACCAG TGCGGAAAAG GAAACAGCGA CGGAGTTGTA AAAGCCTACG AGAGCGTAGG GGCTGACATG GCTAACGTGG AGCTAAGCGA CTTCATCGAC AACATGGCAG CCGCTTACGA ATGGGCTGAT TTTATTGTAT GTAGAGCCGG CGCGCTTACC GTTAGTGAAG TGGCTGCGTC TGGCCGCGCC GCGATTTTTG TCCCCCTGCC ATTTGCAGTA GATGATCATC AAACAAAAAA CGCGCAGTCG TTAGTGAAGC AAAATGCAGC GCTAATGATT GCACAATCTG TATTGAAACA GAACTTAGGG CAGGCAGTGC GTCGATGGTT AGAACACCCC GAAGACTGCT TAAAAATGGG TGCGCTAGCA AAAACATGTG CAAGCATTCA TGCCACGGAA AATGTAGTAA GCCACGTTAA AAGCGTGGTA GGAGAAGGGG ACTAA
|
Protein sequence | MAKRCLIMAG GTGGHVFPGL AVANALRAEG WDIHWLGTAE RMEAQVVPKH DIPIHFIPVK GLRGKGISAR IQGAVALVKS LFSARRIIKR LQPDIVVGFG GYASGPGGVA AKSLGIPVIV HEQNAAAGMT NKLLSKLASR VLLGFDDAKE QFSGAADNVH TVGNPVRDDI WQVKPKKRES YAGATSLNML VVGGSLGAQI LNETVPETCG VLNGLSIKHQ CGKGNSDGVV KAYESVGADM ANVELSDFID NMAAAYEWAD FIVCRAGALT VSEVAASGRA AIFVPLPFAV DDHQTKNAQS LVKQNAALMI AQSVLKQNLG QAVRRWLEHP EDCLKMGALA KTCASIHATE NVVSHVKSVV GEGD
|
| |