Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03250 |
Symbol | |
ID | 6778464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3508423 |
End bp | 3511131 |
Gene Length | 2709 bp |
Protein Length | 902 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642756700 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_002127538 |
Protein GI | 196158049 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTCAA GCATCCTTCG AAAAGTATTC GGTAGTAGAA ACGACCGACT ATTAAAAAAA TTACGCAAAA ACGTAGATGC CATTAATGCA CTGGAAGCAG AATTTGAAAA GCTTTCTGAT GAGGCGCTAA AGGCAAAGAC CGACGAATTT AAAGCCCGTA TAGAAAAAGG CGAAGCGCTA GACAATATTC TTGTAGAAGC GTTCGCTACA GTGCGAGAAG CCAGTAAGCG TGTATACGGC ATGCGTCATT TCGACGTGCA AATGCTTGGT GGTCAAGTTT TGCACGAAGG CAAAATCTCA GAAATGCGTA CGGGTGAAGG TAAAACCCTT ACCGCGACGT TACCTACGTA TTTAAATGCA TTGTCAGGCA AAGGTGTCCA CGTTGTTACC GTGAACGACT ACCTTGCCCG TCGTGACGCT GAGTGGAGTA ATCAGTTATT TACCTTCCTT GGTATGCGTG TAGGCTGCAA CATACCGGGT ATGTCACCTG AGCAAAAGCG TGACGCTTAC CAAGCTGATG TGACTTATGG AACCAACAAC GAGTTTGGTT TTGATTACCT GCGTGACAAC ATGGCATTTA GCCCTCAAGA CCGCGTACAG CGCCCCCTTA ACTATGCAGT AGTGGATGAA GTTGACTCCA TTCTTATTGA CGAAGCCCGT ACGCCGCTTA TTATTTCAGG TCAGGCCGAG GATAGTTCAG AGCTTTATCG CCGCATCAAC ACCATTATTC CTAAGCTTGT TCAGCAAGAA AAAGAAGATG AAGAAGGCCA AGAAGGCGAC GGTGATTACA CTATCGACCT TAAAGCAAAA CAAATTCATC TTACCGAGCG CGGTCAGTTA CACGTTGAAG AGATACTTCA CGAAGAAAGC TTATTGCCTG AAGGTGAGTC GCTGTTCGCT GCTGGTAATA TTTCATTGCT TCACCATATC AATGCTGCAC TTCGCGCGCA CAAGTTGTTC TCGAAAGACG TAGATTACAT CGTTAAAGAA GACCAAATCG TTATTGTTGA CGAGCACACG GGTCGTACCA TGGAAGGACG TCGTTGGTCT GAAGGTTTAC ACCAAGCGGT AGAGGCAAAA GAAGGCGTTC GTATTCAAAA CGAAAACCAG ACGCTAGCCT CTATTACTTT CCAGAACTAC TTCCGCCTGT ACAACAAACT TGCGGGTATG ACAGGTACAG CTGATACCGA AGCGTTTGAA TTCAACCATA TTTACGGCCT AGAAACGGTA GTGATCCCAA CTAACCGCCC TATGCAGCGT AAAGATATGC CAGATCTTAT CTACCTAACG GCGGAAGAGA AGTACGAGGC TATTGTTGAA GATATTAAAG CGTGTGTTAA GCGCGGACAG CCAACCCTTG TGGGCACCGT GTCTATCGAA AACTCTGAGC TTATTTCTCG CATTCTTAAG AAATCGAAAA TTCCTCATAA GGTACTAAAC GCCAAGTTCC ACGAACACGA AGCTGATATT GTTGCTCAAG CAGGTAAGCC TGGCGCTGTC ACCATTGCAA CTAACATGGC TGGCCGTGGT ACGGATATCG TACTTGGTGG TAACTGGCAG GCCGAGCTTG AGAAAATCGA GAATCCGACC GAATCACAAA TTGAAAAAGT AAAAGCGGCG TGGAAAGAAA GCCACGATGC GGTACTAGCG GCAGGCGGTC TTCATATAAT TGGAACCGAG CGTCACGAGT CACGCCGTAT TGATAACCAG CTACGTGGCC GTTCAGGCCG TCAGGGTGAC CCTGGATCAA GCCGTTTCTA CCTATCACTA GACGATGCCC TAATGCGCAT CTTTGCCTCT GAGAAAATGG GCAACATGAT GAAGCGTTTA GGTATGGAAC GCGGTGAAGC GATTGAGCAT CCGTGGGTGA CCCGCGCTAT TGAAAATGCC CAGCGCAAAG TAGAAGGTCG TAACTTCGAT ATTCGTAAGC AACTGCTTGA GTACGATGAT GTGGCTAACG ATCAGCGTAA GGTTATTTAC GAGCAGCGCA ACGAGTTGCT AGATGAAGGC GACATTAGTG AAACTATCGC TGTAATCCGC GAAGATGTTG TTTCAAGCGT CGTGGACGAA TACATTCCGC CACAATCACT AGAAGAGATG TGGGACGTAA GCGGCTTAGA AGAGCGTATG CGCGCCGACT TCGCGGTAGA CCTGCCTATT AAGACATGGC TTGAAAATGA CGACAAGCTG TATGAAGAGA AGCTTCGCGA GCGCATTTTA AATGAAGTCG TCGATGCGTA TAAACAGAAA GAAGCGGTTG TGGGCGAGCA GGTGCTACGC CAGTTTGAAA AAGCAGTAAT GCTACAAAAC CTAGACAGCC ACTGGAAAGA GCATTTAGCG GCTATGGATC ACCTTCGTCA AGGTATTCAC TTACGTGGCT ACGCGCAGAA AAACCCTAAG CAAGAATACA AGCGTGAGTC GTTTGCGCTG TTCTCTGAAA TGCTAGAAGC GCTTAAGGTC GAGGTTATTA CTATCCTTGC CCGCGTAAAA GTGCAAGCAG AAGAAGACGT GCAAAAAGTA GAAGAACAAC GTCGCCAAGC TGACGATGTA CCAAAGAACT TTGAGCATGA AGACGCCACC GCAGCGCCAG AGGAAGCGAG CGATCAGGTG CGTACACAGG TTCGCGAGGG AGCCAAAGTA GGCCGTAACG ACCCATGCCC TTGTGGTTCA GGCAAAAAGT ACAAGCAGTG CCACGGTAAG CTTAAGTAA
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Protein sequence | MFSSILRKVF GSRNDRLLKK LRKNVDAINA LEAEFEKLSD EALKAKTDEF KARIEKGEAL DNILVEAFAT VREASKRVYG MRHFDVQMLG GQVLHEGKIS EMRTGEGKTL TATLPTYLNA LSGKGVHVVT VNDYLARRDA EWSNQLFTFL GMRVGCNIPG MSPEQKRDAY QADVTYGTNN EFGFDYLRDN MAFSPQDRVQ RPLNYAVVDE VDSILIDEAR TPLIISGQAE DSSELYRRIN TIIPKLVQQE KEDEEGQEGD GDYTIDLKAK QIHLTERGQL HVEEILHEES LLPEGESLFA AGNISLLHHI NAALRAHKLF SKDVDYIVKE DQIVIVDEHT GRTMEGRRWS EGLHQAVEAK EGVRIQNENQ TLASITFQNY FRLYNKLAGM TGTADTEAFE FNHIYGLETV VIPTNRPMQR KDMPDLIYLT AEEKYEAIVE DIKACVKRGQ PTLVGTVSIE NSELISRILK KSKIPHKVLN AKFHEHEADI VAQAGKPGAV TIATNMAGRG TDIVLGGNWQ AELEKIENPT ESQIEKVKAA WKESHDAVLA AGGLHIIGTE RHESRRIDNQ LRGRSGRQGD PGSSRFYLSL DDALMRIFAS EKMGNMMKRL GMERGEAIEH PWVTRAIENA QRKVEGRNFD IRKQLLEYDD VANDQRKVIY EQRNELLDEG DISETIAVIR EDVVSSVVDE YIPPQSLEEM WDVSGLEERM RADFAVDLPI KTWLENDDKL YEEKLRERIL NEVVDAYKQK EAVVGEQVLR QFEKAVMLQN LDSHWKEHLA AMDHLRQGIH LRGYAQKNPK QEYKRESFAL FSEMLEALKV EVITILARVK VQAEEDVQKV EEQRRQADDV PKNFEHEDAT AAPEEASDQV RTQVREGAKV GRNDPCPCGS GKKYKQCHGK LK
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