Gene MADE_03239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03239 
Symbol 
ID6778424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3497082 
End bp3497450 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content45% 
IMG OID642756689 
ProductResponse regulator receiver domain protein (CheY) 
Protein accessionYP_002127527 
Protein GI196158038 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.354242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAA TACACTTAGT AGATGATTCA GCAACAATGC TAATGAGTAT GGAAATGCTG 
CTTAAACGGG CAGGGTATAC AGTGACAAAA TCAGAAAGTG CGGAGGCAGC GATGGCGGCA
CTTGAGTCCA TATCCCCCAA ATTGATAATA ACAGATCTAA ACATGCCGGG TATGAACGGT
ATAGAGCTAA TAAAAACACT AAAGCAGCAA TCTAAATTTA GATTTACCCC CATGTTGATG
TTAACCACGG AGTCGCAGCA AAGTCGTCGA GAAGAAGCGA AAGCTGCTGG TGCTACAGGC
TGGCTTGTCA AACCCGTCGA GCCAGAGCAA TTGTTAGGTG TAGTAAAGCA GTTGGTACCA
GCTGCATAA
 
Protein sequence
MSAIHLVDDS ATMLMSMEML LKRAGYTVTK SESAEAAMAA LESISPKLII TDLNMPGMNG 
IELIKTLKQQ SKFRFTPMLM LTTESQQSRR EEAKAAGATG WLVKPVEPEQ LLGVVKQLVP
AA