| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03224 |
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| Symbol | |
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| ID | 6778371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3480315 |
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| End bp | 3482354 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642756674 |
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| Product | pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase |
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| Protein accession | YP_002127512 |
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| Protein GI | 196158023 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.133104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGATA TTCAAAAGAT TATCGTACCC GACGTAGGCG GTGACGAAGT TGAAGTTATC
GAGCTATGTG TTGCCGTAGG CGACAACATC GAAGCCGATG AAGGCGTTGT TACTGTTGAA
AGTGACAAGG CGTCAATGGA CATCCCAGCA CCGTTTGAAG GTGAAATTGT AAGTCTGTCT
GTATCAGTAG GCGATAAAAT CAAAGAAGGC GATGTGATTG GTGAAATGAA GGCTGCAGGT
GGCGACAGTT CTGATGAGAG CACCGCTGAA GAATCATCTT CAGACAACGC TTCACAAGAA
GAAGCGCCTA AGCAAGATGA AGCACCGAAA GAAGAAAGCA AGTCAGAGGC AGCACCAGCT
GCGTCTGGCG GCAGTGAAGT GATTGAAGTC GCAGTACCGG ATATTGGCTC TGACGACGAA
GTTGACGTTA TCGATGTATT GGTTTCAGCG GGCGACACCA TCGAAAAAGA AGATGGTCTT
ATTACCCTGG AAACCGATAA AGCAACGATG GACGTTCCTT CAACACATGC AGGTACAGTG
AAAGAAGTAT TCATCAGTAC TGGCGATAAA GTGAAAGAAG GCACAGTTGT TATTAAGCTT
GAAATAGCGG GTTCAAGCTC GTCTTCAAGT GAATCGGCTT CTAGCGATGC TTCTTCTGAA
GCATCTGCAC CGGCTGCGCA GGAAAGCGAA AAGCAAGAGT CAGCTCCTGC GGCGTCTGCA
AGTAGCGAAA CTATCGAAGT TGCTGTACCA GACATTGGTG AAGACGGTGA AGTTGACGTT
ATCGACGTGC TTGTATCGGT AGGCGATACC GTTGAAAAAG AAGACGGCCT GATTACGCTA
GAAACTGATA AAGCCACCAT GGATGTACCT TCAACGCACG CAGGTACCAT TAAAGAAGTC
TTTATCAAAA CAGGCGATAA AGTTAAGCAA GGCACATTAG TTGTTAAGCT AGAAAATAGC
GGTGGCTCAT CTGAACAGGC ACCATCAGCA CCTAAAGCAG AAAAGCCTGC TGAAGCGCCT
AAGCAAGAAG CACCTAAACA AGCGTCACAG CAAGAAGCCT CTCAAGGCCG TTCTCCTGTG
CCGCCAGCGC CAGAAGCTAA GAATACAGGT AAAGCACATG CTTCACCTTC GGTTCGCCGT
ATTGCTCGCG AGTTTGGTGT AGACCTGACT CAAGTTAGCG GCTCTGGCCC TAAAAACCGT
ATCTTGAAAG AAGACGTTCA AGCTTACGTG AAAGCTGAGC TGGCGAAACC TCGCACAGCA
GCCGCTTCTG GCAGCGCACC AGTAGGCGAC AACGTACTTC AAATTGTGCC AGTTAAACCT
GTTGATCACA GCAAGTTTGG TGAAATTGAA GAGCAAAAGC TTTCGCGCAT TCAGAAGATT
TCTGGCCCGT TCTTACACCG TAACTGGGCG ACGATTCCGC ACGTTACGCA GTTTGATGAA
GCCGATATCA CAGACGTAGA AGATTTCCGT AAAGAGCAAA ACGCTTACCA CGCGAAGATT
AAGTCTGGTC TTAAGATTAC GCCGCTAGTA TTCGTAATGA AAGCGGTAGC GAAAGCCCTT
GAGAAATACG AAGTATTTAA CTCATCACTG TCTGACGACG GCGAAAGCTT AATTATCAAG
AAGTTCATTA ACATTGGTAT TGCGGTGGAA ACACCGGGCG GCCTTGTAGT TCCTGTTATT
CGCGACGTGA ATAAGAAAGG CATTGAAGAA CTTTCTCGCG AGCTTATCGA AACATCGAAG
AAAGCCCGTG AAGGTAAGCT TAAAGCGGCT GACATGCAGG GTGGTACGTT TACTATCTCT
AGCCTAGGTG GTATTGGCGG TACGGCGTTT ACGCCTATTG TAAATGCACC AGAAGTCGCC
ATATTAGGTG TGTCTAAGTC TGAGATGAAG CCTAAGTGGA ATGGTAAAGA GTTCGAGCCG
CGCTTAATGG TGCCGCTAAG CTTGTCTTAC GACCACCGAG TAATCGATGG TGCGGTAGGT
GCAAGATTCT CTACTGAGGT TGCTGCAAAC CTAACTGACT TACGCAGAAT CATACTTTAA
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| Protein sequence | MSDIQKIIVP DVGGDEVEVI ELCVAVGDNI EADEGVVTVE SDKASMDIPA PFEGEIVSLS
VSVGDKIKEG DVIGEMKAAG GDSSDESTAE ESSSDNASQE EAPKQDEAPK EESKSEAAPA
ASGGSEVIEV AVPDIGSDDE VDVIDVLVSA GDTIEKEDGL ITLETDKATM DVPSTHAGTV
KEVFISTGDK VKEGTVVIKL EIAGSSSSSS ESASSDASSE ASAPAAQESE KQESAPAASA
SSETIEVAVP DIGEDGEVDV IDVLVSVGDT VEKEDGLITL ETDKATMDVP STHAGTIKEV
FIKTGDKVKQ GTLVVKLENS GGSSEQAPSA PKAEKPAEAP KQEAPKQASQ QEASQGRSPV
PPAPEAKNTG KAHASPSVRR IAREFGVDLT QVSGSGPKNR ILKEDVQAYV KAELAKPRTA
AASGSAPVGD NVLQIVPVKP VDHSKFGEIE EQKLSRIQKI SGPFLHRNWA TIPHVTQFDE
ADITDVEDFR KEQNAYHAKI KSGLKITPLV FVMKAVAKAL EKYEVFNSSL SDDGESLIIK
KFINIGIAVE TPGGLVVPVI RDVNKKGIEE LSRELIETSK KAREGKLKAA DMQGGTFTIS
SLGGIGGTAF TPIVNAPEVA ILGVSKSEMK PKWNGKEFEP RLMVPLSLSY DHRVIDGAVG
ARFSTEVAAN LTDLRRIIL
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