| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03136 |
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| Symbol | |
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| ID | 6778069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3388190 |
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| End bp | 3389737 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642756586 |
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| Product | exonuclease SbcD |
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| Protein accession | YP_002127424 |
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| Protein GI | 196157935 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAG CCGCATTGCG CCGAATGCGT TTCTCTATCT CCAATGCAAC AAGCCTGGTT
CACTTCTACA TGAAAATATT GCATACATCT GACTGGCATT TAGGTCAGAG TTTTTTTACG
AAAAGTCGCA AAAAAGAACA TGCCGCTTTC CTTAAATGGC TTCTCCAACA AGTAGAAGCG
CATCAAATAG ATGCGATTAT TGTCGCGGGC GATGTGTTTG ACACTGGCAC GCCGCCAAGC
TATGCCCGAG AGCTATACCA TGCGTTTATC GGTGAATTAC AAGGCATGCA GTGTACGCTA
GTGGTGCTGG GGGGAAATCA CGACTCGGTG TCGGTACTAA ATGAAAGCAA GGCGCTACTG
AAATATTTAA ATAGTCATGT GATAGCCAGT ACATATGGAG AAATAAGTGA ACAGGTGATT
GCGCTTAAAA ACCGCAAGGG TCAGCCCAGT GCCGTGCTTT GTGCTGTGCC ATTTATTCGC
CCTCGTGATG TATTGGTAAG TGAGTCAGGG CAAAGCGCAA CTGACAAGCG CCAAGCGCTG
GGCAATGCAA TAAAACAGCA CTATGCGTCG CTTTATAGTG AAGCCCTAAC ACTACGCAAT
ACATTGGGGA ATAATCGATT AGAAGAGGGC ATTGATCATA GCGCTGCTAT TCCCATTATC
GCCACGGGGC ATTTAACCGC CTTGGGTGTA AGTCAGTCTG AAAGTGTGCG TGATATCTAC
ATTGGCACCC TTGAAGGCTT TGACGCCAAA GGTTTTCCGC CAGCCGACTA TATCGCATTA
GGCCACATCC ATAGACCCCA AAAGGTAGCG AAAGCCGAAC ACATTCGCTA TTCAGGCTCG
CCTATACCGC TAAGCTTTGA TGAATTAACT TCTCAAAAAC AAATCGTGCT GGTGGAGTTT
GATGGGGTAA GTACGACACC CAATATCTCA ACCCTTCCAG TACCTCGTTT TCAAGCCATG
GAAGTAATAA AAGGGGACTT AAAAGCGATT GAGGCGATGA TTAATGAAAG CGAAGCCATA
GCCTATGCTT CCCTAGCAAA CGAAGACCAA AACGCCAGTT CAGAACCTCT CGCTAGCCAT
GAAGCTTCTA GTTCTAACGA AAAACCTTTT GGCTCAAAAG ACCCCGTGTG GTTGTGTATT
GAGGTTGAAA CCGAAGACTA TCTGACTGAT TTACAGCAGC GAATTCAGGG CTTATTAGAA
GGTAAAAACG CTGAAATTCT TCAGCTAAAA CGCATGCGTA AGCGCACGGT GAAAAGCCTG
AGCGAAAAGC AAAATATTCA GCTTAGCGAG CTGTCAGTGA ACGAGGTTTT TGAAGCGCGC
TTAGCGCTAG AGTCGTTGGA TGAGGAACCT AATGAAACGT CCAACGAGGC TTCAGAACTG
CCGCAGAAAA ATACTGAGCC GTCACGTATT AAGCGTATTA AACATTTGTT TGCCGAAGCC
GTAGCGCTAG TGCATACCAA TAAAGAAGAC TTAGAAAACA GCGAAGGGCT AGTACAATCA
AAGCCTGCAA GCGAATCTGA ACCAAACAAA GAAACGCGGG GCGATTGA
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| Protein sequence | MAKAALRRMR FSISNATSLV HFYMKILHTS DWHLGQSFFT KSRKKEHAAF LKWLLQQVEA
HQIDAIIVAG DVFDTGTPPS YARELYHAFI GELQGMQCTL VVLGGNHDSV SVLNESKALL
KYLNSHVIAS TYGEISEQVI ALKNRKGQPS AVLCAVPFIR PRDVLVSESG QSATDKRQAL
GNAIKQHYAS LYSEALTLRN TLGNNRLEEG IDHSAAIPII ATGHLTALGV SQSESVRDIY
IGTLEGFDAK GFPPADYIAL GHIHRPQKVA KAEHIRYSGS PIPLSFDELT SQKQIVLVEF
DGVSTTPNIS TLPVPRFQAM EVIKGDLKAI EAMINESEAI AYASLANEDQ NASSEPLASH
EASSSNEKPF GSKDPVWLCI EVETEDYLTD LQQRIQGLLE GKNAEILQLK RMRKRTVKSL
SEKQNIQLSE LSVNEVFEAR LALESLDEEP NETSNEASEL PQKNTEPSRI KRIKHLFAEA
VALVHTNKED LENSEGLVQS KPASESEPNK ETRGD
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