| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_03135 |
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| Symbol | |
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| ID | 6778063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 3384462 |
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| End bp | 3388178 |
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| Gene Length | 3717 bp |
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| Protein Length | 1238 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 642756585 |
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| Product | exonuclease SbcC |
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| Protein accession | YP_002127423 |
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| Protein GI | 196157934 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.520091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCTTAC GCCTTAAAAA TTTAAATGCC CTTAAAGGGG AGTGGAAGAT AGATTTCACT
CAGTCACCCT TTATCGACAA CGGCTTGTTT GCCATTACTG GCCCAACCGG TGCGGGTAAA
ACCACCCTGC TCGATGCAAT ATGTTTAGCT TTATATCACC AAACGCCTCG ACTTGGGCCT
ATATCAACGT CGAACAACGA CATTATGACT CGCGGTACAG CGGAGTGTTT GGCGGAAGTT
GAGTTTGATA TTAAGGGTAA AGCGTACCGT GCGTTTTGGA GCATGCGCCG CGCCAGAGGA
AAAGTTGACG GTAATCTGCA AAGTGCCGAT GTTGAGCTGG CTGAAGTTGA AAGTGGCGAT
GTGCTAGCAA CCCAAGTTCG CCCTAAAAAT GAAGAGATAG AAAAGCTCAC TGGTCTGAAC
TTTGCGCGCT TCACAAAATC TATGATGTTG TCGCAGGGCG ACTTTGCTGC CTTTCTAAAT
GCCAATGAAG GCGACAGGGC TGAGTTACTT GAAGAACTAA CTGGTACTGA AATCTATGGG
CAAATATCAC AAGCAGTACA TCAGCAATTT AGCGAGGCTA AACAAAAGAA AAAAGAATTC
GCGATAAAGC TTGAAGGGGT AACGTTACTT AGCAATGAGC AAATTACCCA GTTGGAAGAA
GATCAAGACG GTATTAATGG TCAAGTTGCG GCGTTTAACC AAACACTTAC TGAACTACAA
CAGCAACAGC AATGGCAACA ATCATTCAAC ACCAATGCAC TCGCGCTTAA AGAGGCGAAA
GAAGCACAGC TTGCTGCGAA TAATGCGATC GATGAGGCGA AACAAGAACT TAATGTGCTA
ACTCACAGTG AGCCCGCCGA AAAGCTTCGC CTCCCTTTTT TGCAGCGAAA CGGGCTTCAG
CAAGACCTAT CAGGCTACAA AGAAAAGCTC AATGAAAAAG CGGCTCAGCT TCCCGAATTA
AAAACGCAAA AAGAACAGCT TAGCTCGGAA GTGACCAATG CTGAACGAGC GCTACTTCAA
ACTAAGCAAC AAAGCAGTGA ACTTGAAAAG CGCATAAACG AGCAGGTCGT TCCGTTAGAT
AATAATATAG CGCAGAGTAC AGCCGCCCAA CAAAAAGCAA ATGACAGCGC TGCGCAGTTT
ACGCGCTCCA TAAATGCGCT AACTAAAAAG CGTACAGAAA TAGAAAATGC GTCAGCCGAT
AACAAGAAAA AATTGGGTGA ATTAGAAGCC TACCTAAATG AAAACCACTC ACTCAGCAGT
ATGGCCGAGT TTATCAGCGG TTGGAGTGAA ACTGCGCGGC ATATTGAGAG CGAACAGAAG
CAAATAGCGA CACTTAAACA AAGCGCCCAA GAGCACCGCC ACGCGCTTTC CTCAATTGAT
GAAGCTATTA CACAAACGAA TCAGGCGCTG AAAACATTAA CGCAAACTTT TGATAATGCA
ACCGCCAACG TCGCCACTTG TGAAGAGGCG TTAAATGCTG CGCTTTCTAA CGCCGATAAA
AATAGCGCAA CCAGTAAAAC AAGTCTTCAA CAAGAGCGGG ATACCAAGCT TCATCACTGG
GACAACCTGA TTCAGATAGG TCATATTCAA CAGCAATATT TGGCACTAGA GCAAGACAAA
GTATCGCTGA GTGCACAGAA GGAAGACTTA TCGAAAAAAC TAGCGCAGCA GCAATCTGAC
CGACAAGCCT TGGTTGACGC CTACAAACAA ACACGCAGTA ATTTAAAAGA CATAGAGGCG
CTGATCGCCC TAGATGCTGA AGTGGCACAC CTGCGCGCCC AGCTAAAAAG TGGCGAGCCA
TGTCCGGTAT GTGGAGCTAA CGAGCACACT ACGGCTAGCG TGGCGATTGA TATACCTGAA
ACTGTACAAA AGCGTGACAG CTTAAAAGAG CAGTTAGATG ATATTGAGCA ACAAGGAGCA
CAGGCAAAAG AAAGCGTTAC ACACACTGAG TTAACCCTTA CCCAGGTTAA TAAGCAGCTA
GACCAAACAA ACGCAAAACG CGATGCGTTG GTAGAAAAGT GGAAGCAGTT TTCAAGCGTA
CTTAGCGCTG ATATATCTAG CTTTGAAAAA GTCGACATTA ATACATCACA AAGTGTCGCC
CAATTTACCG AGCAGTTTAA AACCCGTCTT GATGACATTA GTGCCCAGTT AACGCGCATA
GAGCAGTGTG AGCAAGCATT AAATACTGCA ATGCAGAGTA AAAATGAGGC GCAACAAGCG
TTGCAAGCCA AACAGTCAGA TGTTGCCGTT AGCATGCAGC GGCGCGAAAC ATTGGAAAAG
CAACTCACCG AACGCAACGC AGAAGTAGAG AACAAAACTA AAGGGGTTAA CGACAGCATT
GCAACACTTC GTGAGACTAT GACGGCGCAC GGTGCTGAAG TTCACAACCT GCCTATTGAA
GGAATTGCTA CGTGGTTAAA TGAAGAAGCC GAAGCGCTCA AAACTTATAA ACACAATCAT
CAACTGCACA CCAACCTTAA TGAAGAGCTA CAAGAGGTGA GTCGTACCTT GCTTGTACTA
AACCGTGATA TTGAAAGTGC AGAAACACAG CTTAAAAGCG TATCTGAAGA ACTCATGCAG
CTAGATAGCA CGCTGATAGA ACTGCGCAAA TCACGTATGG CGGTATTCCC TGAAGGTAAT
ATTTCAGAAG TAAGGAGTAA AGCAAGCGCC GCCCAAGTAC AGGCTGAGCA AAAATTGAGT
GAATGCCAAT CTCGCTTGCA CCAAACGGAT ACTATTTTGT CTCGGTTAGA AGCAGAAATT
GCCCAGCTTA ATGAGCAAAT ACGCGAGAAA GAGCAGGCAC TTACAGAGGC GACTGAGAAC
TTTAATCGCC AGCTAGCAAA CAGCCCATTT GCCGATGAGC AAGCGTTTAG CAATGCGCTA
CTAGATGAAG AAACCCGTAA TAAGTTGCTT GAGCTGCAAA AGCAATTAAC GCAGCAAAAA
CAACAGGCTG ACCTTAAACT AGAAAACGCG CTAGCGACAC AGCAATCGCT AACAGCGCGT
GACCATGCAC AGCAGTGGCA GCGCAAGCTA GAAGAACATG GTATGCAGTG GGTTGAAAAT
CAAATTACCG AGCAAGCGCA ACAAAAAGAC GCTTTGTTAT CCACCCTAGG GCAAATTAAA
CAGCAGTTAA ACGCCAATAA TGAAGCCCGT GAAAAGCAAA GGACGCTGGT AGAAGAGATG
GCCGCGTTCG AAACCTATTA CGATGATATT ACTTACCTGC ATTCGTTGAT TGGTTCGGCA
AGCGGTGACA AATTCAGACG TTTTGCACAA GGGCTTACGC TGGACAACCT TGTCCAACTT
GCTAACCAGC AGCTAGAAAA GTTGCACGGT CGCTATCAGC TTATTCGCAA AGAAAACGAC
GGGCTAGGCT TAAGTGTTTT AGATACTTGG CAAGGAGACG TGGTACGCGA TACCAAAACG
CTGTCGGGTG GAGAAAGCTT CTTAGTGAGC CTTGCGCTGG CATTGGCGTT ATCTGACCTG
GTAAGTCACA AAACCAGTAT CGATTCACTA TTTTTAGATG AAGGCTTTGG AACCCTTGAT
GCTGAAACCT TAGATGTGGC CCTCGATGCG CTAGACAACT TAAATGCCAG TGGAAAAATG
ATTGGCGTCA TAAGCCATAT CGAGGCCATG AAAGAGCGAA TTCCTACTCA ACTTAAAGTA
ATTAAACGCA ACGGTGTGGG CTTAAGTGCA CTAGAAAAGC CTTATGCGGT GGGGTGA
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| Protein sequence | MTLRLKNLNA LKGEWKIDFT QSPFIDNGLF AITGPTGAGK TTLLDAICLA LYHQTPRLGP
ISTSNNDIMT RGTAECLAEV EFDIKGKAYR AFWSMRRARG KVDGNLQSAD VELAEVESGD
VLATQVRPKN EEIEKLTGLN FARFTKSMML SQGDFAAFLN ANEGDRAELL EELTGTEIYG
QISQAVHQQF SEAKQKKKEF AIKLEGVTLL SNEQITQLEE DQDGINGQVA AFNQTLTELQ
QQQQWQQSFN TNALALKEAK EAQLAANNAI DEAKQELNVL THSEPAEKLR LPFLQRNGLQ
QDLSGYKEKL NEKAAQLPEL KTQKEQLSSE VTNAERALLQ TKQQSSELEK RINEQVVPLD
NNIAQSTAAQ QKANDSAAQF TRSINALTKK RTEIENASAD NKKKLGELEA YLNENHSLSS
MAEFISGWSE TARHIESEQK QIATLKQSAQ EHRHALSSID EAITQTNQAL KTLTQTFDNA
TANVATCEEA LNAALSNADK NSATSKTSLQ QERDTKLHHW DNLIQIGHIQ QQYLALEQDK
VSLSAQKEDL SKKLAQQQSD RQALVDAYKQ TRSNLKDIEA LIALDAEVAH LRAQLKSGEP
CPVCGANEHT TASVAIDIPE TVQKRDSLKE QLDDIEQQGA QAKESVTHTE LTLTQVNKQL
DQTNAKRDAL VEKWKQFSSV LSADISSFEK VDINTSQSVA QFTEQFKTRL DDISAQLTRI
EQCEQALNTA MQSKNEAQQA LQAKQSDVAV SMQRRETLEK QLTERNAEVE NKTKGVNDSI
ATLRETMTAH GAEVHNLPIE GIATWLNEEA EALKTYKHNH QLHTNLNEEL QEVSRTLLVL
NRDIESAETQ LKSVSEELMQ LDSTLIELRK SRMAVFPEGN ISEVRSKASA AQVQAEQKLS
ECQSRLHQTD TILSRLEAEI AQLNEQIREK EQALTEATEN FNRQLANSPF ADEQAFSNAL
LDEETRNKLL ELQKQLTQQK QQADLKLENA LATQQSLTAR DHAQQWQRKL EEHGMQWVEN
QITEQAQQKD ALLSTLGQIK QQLNANNEAR EKQRTLVEEM AAFETYYDDI TYLHSLIGSA
SGDKFRRFAQ GLTLDNLVQL ANQQLEKLHG RYQLIRKEND GLGLSVLDTW QGDVVRDTKT
LSGGESFLVS LALALALSDL VSHKTSIDSL FLDEGFGTLD AETLDVALDA LDNLNASGKM
IGVISHIEAM KERIPTQLKV IKRNGVGLSA LEKPYAVG
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