Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03124 |
Symbol | |
ID | 6778003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3373483 |
End bp | 3374250 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642756574 |
Product | hypothetical protein |
Protein accession | YP_002127412 |
Protein GI | 196157923 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTTTAC GAAAGTGTTT TGGCATAGCA AGCCTATCAA CCTTGCTAGC GTTTTCCGCT ACTGTTTCTG CACAACAGCC ATCAGGCTCA CAGCAACCAC AAGGCTGGAT GTGGGGCTTT GGCGTTGCTG CGTCACAAGA TGTTTATACC GACTTCGATA ACCGTATCGT GCCTATCCCC ATCATTGGCT ATACAGGCGA GAAATTACGG GTTTACGGGC CTTTTGTGGG CTATCAACTC TTCCAACAAG ACGGTTTTAC ATTGGATGCC CAACTTGTCC CTGTGTTTGC TGGTTATGAA GAAGACGACA GCGCTGTATT TACAGGCATG GAAGATAGAG ACTTTAGCTA CGCGGCTGGC ATAGGACTTA ATTACAATAC CGGCGGATGG GTATACTCCC TTTCTACCAA TGCTGATATT TTAGGGAAGT TCGATGGTTA TCAGGCCTCA GTCCGCGTCG GGAAGCAATT TAGAATCGAC CAGTTTATGA TAGAACCGTC TATTGGCGTG AACTATCAAG ATAGTAATTA CGTTGATTAC TACTATGGTG TACGCCCTGA AGAAGCCACA GCAACTCGAA GTAAATATAA CGGCGATAGT GCAGTTAACA CTGAGGTACG CCTTGCGGTA TCGACACGCC AGTTCTTTAA CGGCATGACC CGCCTGGAAC TAGGGGCAAC CTTTTTTGAT GACAGTATTA GCGACAGCCC GCTTACCGAC GATGATACGT CGTTGAGCGC GATGCTCGTT TATACCCGCT TTTTCTAA
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Protein sequence | MTLRKCFGIA SLSTLLAFSA TVSAQQPSGS QQPQGWMWGF GVAASQDVYT DFDNRIVPIP IIGYTGEKLR VYGPFVGYQL FQQDGFTLDA QLVPVFAGYE EDDSAVFTGM EDRDFSYAAG IGLNYNTGGW VYSLSTNADI LGKFDGYQAS VRVGKQFRID QFMIEPSIGV NYQDSNYVDY YYGVRPEEAT ATRSKYNGDS AVNTEVRLAV STRQFFNGMT RLELGATFFD DSISDSPLTD DDTSLSAMLV YTRFF
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