Gene MADE_03124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03124 
Symbol 
ID6778003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3373483 
End bp3374250 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content47% 
IMG OID642756574 
Producthypothetical protein 
Protein accessionYP_002127412 
Protein GI196157923 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTAC GAAAGTGTTT TGGCATAGCA AGCCTATCAA CCTTGCTAGC GTTTTCCGCT 
ACTGTTTCTG CACAACAGCC ATCAGGCTCA CAGCAACCAC AAGGCTGGAT GTGGGGCTTT
GGCGTTGCTG CGTCACAAGA TGTTTATACC GACTTCGATA ACCGTATCGT GCCTATCCCC
ATCATTGGCT ATACAGGCGA GAAATTACGG GTTTACGGGC CTTTTGTGGG CTATCAACTC
TTCCAACAAG ACGGTTTTAC ATTGGATGCC CAACTTGTCC CTGTGTTTGC TGGTTATGAA
GAAGACGACA GCGCTGTATT TACAGGCATG GAAGATAGAG ACTTTAGCTA CGCGGCTGGC
ATAGGACTTA ATTACAATAC CGGCGGATGG GTATACTCCC TTTCTACCAA TGCTGATATT
TTAGGGAAGT TCGATGGTTA TCAGGCCTCA GTCCGCGTCG GGAAGCAATT TAGAATCGAC
CAGTTTATGA TAGAACCGTC TATTGGCGTG AACTATCAAG ATAGTAATTA CGTTGATTAC
TACTATGGTG TACGCCCTGA AGAAGCCACA GCAACTCGAA GTAAATATAA CGGCGATAGT
GCAGTTAACA CTGAGGTACG CCTTGCGGTA TCGACACGCC AGTTCTTTAA CGGCATGACC
CGCCTGGAAC TAGGGGCAAC CTTTTTTGAT GACAGTATTA GCGACAGCCC GCTTACCGAC
GATGATACGT CGTTGAGCGC GATGCTCGTT TATACCCGCT TTTTCTAA
 
Protein sequence
MTLRKCFGIA SLSTLLAFSA TVSAQQPSGS QQPQGWMWGF GVAASQDVYT DFDNRIVPIP 
IIGYTGEKLR VYGPFVGYQL FQQDGFTLDA QLVPVFAGYE EDDSAVFTGM EDRDFSYAAG
IGLNYNTGGW VYSLSTNADI LGKFDGYQAS VRVGKQFRID QFMIEPSIGV NYQDSNYVDY
YYGVRPEEAT ATRSKYNGDS AVNTEVRLAV STRQFFNGMT RLELGATFFD DSISDSPLTD
DDTSLSAMLV YTRFF