Gene MADE_03118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03118 
Symbol 
ID6776833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3368162 
End bp3369088 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content45% 
IMG OID642756568 
ProductFOG: TPR repeat 2396 protein 
Protein accessionYP_002127406 
Protein GI196157917 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCCA TATTTAAAAG AGCCTGCTTT TTAGCAGGCT TTTCTCTGTT ACTTTTACTG 
ACTGGCTGTC AGGCCACACC ACAAGCAGAC CAACTGCGAC AAGCAGGCCT TGCTTCTTTG
CCACAGTCGC ACACTATTCA ATCTGTGCCT TTTACTCCCC AAGAGCAGTT CTACTGCGGG
CCTACTACGC TCTCCGAAGT GTTTGGCTAT TATGGAAAAA GTGTCTCTCC TTCTGATATA
GCGCCTAAGT TATTTATTCC AAATAAAGAG GGTAGCCTTC AGTTAGAAAT GGTGAGTGCC
ACCCGTCAGT ACGGCTTTTT GCCGTATACC GAGCGAGGAA CGCTCTCTTC TGTGATGCAG
TTTGTTAAAG ACGATATACC AGTAGTGGTT TTTCAAAACT TATCTATTCA GCTTTTGCCA
CAATGGCATT ATGCCGTCGT GATTGGGTTT GATAGCGAGA AAGGAACCGT GACACTGCAC
ACGGGGCTTA CGCCAAATCA TGAGATGTCG CTAGAACTCT TTGAGCGAAC CTGGGGAAGA
GGAAATTATT GGTATCTTGC CCCCGTTCCG CCGCGCGTTA CCTCATCACA AATGACACCA
TTCACTTATG TGAGTGCTGC CTATGACATG CTCAAAGTAG GCGATAAGCA GCAAGCATTA
GCGTTTTTAG AAACCGCTTC GCAAACATGG CCGGAATATT GGCTAAGCTA TTTTCTCATT
GCTAATTACT ATCTGGAAGA GAACGACAGT CAAGCGATAA CATGGTTTGA AAAAGGTTAT
GATGTAGGCC AGCAACAGCA AGCATATATA CACAATTATA TCGTTGGGCT AAGACAAAAT
AACTTGCGCG ACCAAGCGAA CAAAATTCTT AAACAGGGGC TTAAGCGCTT TCCCGACAAC
GAGGATCTTA TAAAGCTAAA AGAGTAA
 
Protein sequence
MNAIFKRACF LAGFSLLLLL TGCQATPQAD QLRQAGLASL PQSHTIQSVP FTPQEQFYCG 
PTTLSEVFGY YGKSVSPSDI APKLFIPNKE GSLQLEMVSA TRQYGFLPYT ERGTLSSVMQ
FVKDDIPVVV FQNLSIQLLP QWHYAVVIGF DSEKGTVTLH TGLTPNHEMS LELFERTWGR
GNYWYLAPVP PRVTSSQMTP FTYVSAAYDM LKVGDKQQAL AFLETASQTW PEYWLSYFLI
ANYYLEENDS QAITWFEKGY DVGQQQQAYI HNYIVGLRQN NLRDQANKIL KQGLKRFPDN
EDLIKLKE