Gene MADE_03094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03094 
Symbol 
ID6777646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3349601 
End bp3350203 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content49% 
IMG OID642756543 
Productputative deoxyribonucleotide triphosphate pyrophosphatase 
Protein accessionYP_002127382 
Protein GI196157893 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTC CAGAAAAAAT TGTTCTCGCC ACAGGTAACC AAGGCAAGGT GCGTGAGTTT 
GCATCCTTAT TTGCAGATTA CGGTGTAGAC GTAGTAGCGC AAAAGGAATT AGGTGTATCT
GATGTACCGG AAACGGGAAC CACATTCGTT GAAAATGCCA TTATTAAAGC GCGCCATGCC
GCACAGGTGA CCGGCCTTCC TGCTATTGCT GACGACTCAG GCTTGGTGGT GGATGCCCTA
GGCGGTGAAC CCGGCATCTA TTCAGCACGC TATGCTGGCG CTGATGCAAC TGATGATACC
AATATCGACA AGCTATTAGC TTCCCTTGAT GGCGAAACTC ATCGCAAGGC ACACTTCTTC
TGTACTTTAG TGTTCATGCG TCATGCCGAC GACCCTGTAC CGCTGGTTAG CCAAGGTAAA
TGGGAAGGGG AAATTTTAAG CGCACGTTCT GGTAACGACG GTTTTGGTTA CGACCCTGTG
TTCCACGTGC CAACTCACGG CTGCACCGCT GCTGAATTGG AAAAGGCCGA GAAAAACCGC
ATAAGCCACC GGGGTAACGC CCTTAGTATT TTGCTTGATA CAATGAGAGC AACGTTTGCG
TAA
 
Protein sequence
MKFPEKIVLA TGNQGKVREF ASLFADYGVD VVAQKELGVS DVPETGTTFV ENAIIKARHA 
AQVTGLPAIA DDSGLVVDAL GGEPGIYSAR YAGADATDDT NIDKLLASLD GETHRKAHFF
CTLVFMRHAD DPVPLVSQGK WEGEILSARS GNDGFGYDPV FHVPTHGCTA AELEKAEKNR
ISHRGNALSI LLDTMRATFA