Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_03000 |
Symbol | |
ID | 6777507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3254242 |
End bp | 3256038 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642756451 |
Product | GTP-binding protein LepA |
Protein accession | YP_002127290 |
Protein GI | 196157801 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0481] Membrane GTPase LepA |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.873861 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACAAT CGCACATTCG TAACTTCAGT ATTATCGCCC ACATTGACCA CGGTAAGTCT ACGCTGTCAG ATCGTCTCAT CCAGCACTGT GGAGGGCTTA CAGACCGTGA GATGGCTGAA CAGGTTCTCG ACTCTATGGA CCTGGAAAAA GAGCGCGGTA TTACTATCAA AGCGCAAAGC GTTACGCTGA ACTACGAAGC GCGTGATGGT GAAACTTATC AGCTTAACTT CATCGATACT CCGGGACACG TTGACTTCAC TTACGAAGTT TCTCGCTCAC TTGCAGCCTG CGAAGGTGCG CTTTTGGTCG TCGACGCGGG GCAAGGCGTA GAAGCCCAGA CACTGGCTAA CTGCTACACG GCTATTGAAA TGGACATGGA AGTGGTTCCA GTGTTGAACA AAATTGACCT GCCACAGGCC GAACCAGACC GCGTGGCCGA AGAGATTGAA GACATTGTTG GTATAGATGC TCTTGACGCC GTGCGCTGCT CGGCGAAAAC CGGAATTGGT ATTGAAGATG TCCTTGAAGT TATCGTCAAT AAGATTCCAC CGCCAGAAGG CGATCGAGAA GCGCCACTTA AAGCGCTAAT TATCGACTCG TGGTTCGACA ACTATCAGGG CGTTGTATCA TTAGTACGTA TTGTCGAAGG CCAATTGAAC AAGAAAGATA AAATTCAAAT TATGTCGAAT GGCCAAACTC ACCAAGTGGA CAAAATCGGT GTGTTTACGC CTAAGCCTCT TGATACTGGC ATATTAAGGG CAGGTGAAGT TGGTTTTATC ATTGCCGGCA TCAAAGATAT TCAAGGTGCG CCCGTGGGGG ATACTATCAC GCTTGCGCGC GAGCCTGCTG ACGCCATGCT TCCTGGTTTC AAAAAGGTTA AGCCACAGGT TTATGCGGGT ATATTCCCAA TTAGTTCAGA TGATTACGAA GACTTCCGTG ATGCCCTTGC TAAGTTAAGC CTGAACGACG CGTCATTATT CTACGAGCCA GAAAGTTCAG CCGCCTTGGG TTTTGGTTTC CGTATCGGCT TCCTTGGCAT GCTGCACATG GAAATCATTC AAGAGCGTTT AGAGCGTGAA TATGACCTAG GTCTTATTAC TACTGCACCT ACGGTAATTT ACGAAGTCGA AACGACAAAG GGCGAGACAC TTACCGTAGA TAGCCCGGCG AAATTACCGC CGGTTAACGA TATTGCTGAA ATTCGTGAAC CTATGGTTGA AGCCAATATT CTCGTACCAC AAGAGTATTT AGGTAACGTA ATTACTCTAT GTGTTGAAAA GCGCGGTATG CAAACCAACA TGACGTACCA CGGTAAGCAA GTCGCGGTAA CTTACGAGCT ACCAATGGCT GAAGTTGTTC TCGATTTCTT CGACCGTTTG AAGTCTACCA GCCGTGGTTT CGCTTCCCTT GATTATAACT TTAAGCGTTT CCAAACGTCT GACATGGTGC GCGTTGATAT TCTTATAAAC GGCGAACGCG TAGATGCGCT AGCGGTTATT ACGCACAGAG AAAATTCTCA GGGCCGTGGT CGTGAGTTGG TAGAAAAATT ACGTGAATTG ATTCCTCGCC AAATGTTCGA TATCGCTATT CAGGCTGCGA TTGGTAATCA CGTCGTTGCA AGAAGTACGG TTAAGCAGCT GCGTAAAAAC GTAATCGCCA AGTGTTATGG TGGTGACGTT AGTCGTAAGA AAAAGCTACT TCAAAAGCAG AAAGAAGGTA AAAAGCGAAT GAAGCAAGTG GGTAATGTTG AGTTGCCACA AGATGCATTC CTTGCAGTAT TGAAGGTGGG CAAATAA
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Protein sequence | MQQSHIRNFS IIAHIDHGKS TLSDRLIQHC GGLTDREMAE QVLDSMDLEK ERGITIKAQS VTLNYEARDG ETYQLNFIDT PGHVDFTYEV SRSLAACEGA LLVVDAGQGV EAQTLANCYT AIEMDMEVVP VLNKIDLPQA EPDRVAEEIE DIVGIDALDA VRCSAKTGIG IEDVLEVIVN KIPPPEGDRE APLKALIIDS WFDNYQGVVS LVRIVEGQLN KKDKIQIMSN GQTHQVDKIG VFTPKPLDTG ILRAGEVGFI IAGIKDIQGA PVGDTITLAR EPADAMLPGF KKVKPQVYAG IFPISSDDYE DFRDALAKLS LNDASLFYEP ESSAALGFGF RIGFLGMLHM EIIQERLERE YDLGLITTAP TVIYEVETTK GETLTVDSPA KLPPVNDIAE IREPMVEANI LVPQEYLGNV ITLCVEKRGM QTNMTYHGKQ VAVTYELPMA EVVLDFFDRL KSTSRGFASL DYNFKRFQTS DMVRVDILIN GERVDALAVI THRENSQGRG RELVEKLREL IPRQMFDIAI QAAIGNHVVA RSTVKQLRKN VIAKCYGGDV SRKKKLLQKQ KEGKKRMKQV GNVELPQDAF LAVLKVGK
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