Gene MADE_03000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_03000 
Symbol 
ID6777507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3254242 
End bp3256038 
Gene Length1797 bp 
Protein Length598 aa 
Translation table11 
GC content47% 
IMG OID642756451 
ProductGTP-binding protein LepA 
Protein accessionYP_002127290 
Protein GI196157801 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0481] Membrane GTPase LepA 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.873861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAAT CGCACATTCG TAACTTCAGT ATTATCGCCC ACATTGACCA CGGTAAGTCT 
ACGCTGTCAG ATCGTCTCAT CCAGCACTGT GGAGGGCTTA CAGACCGTGA GATGGCTGAA
CAGGTTCTCG ACTCTATGGA CCTGGAAAAA GAGCGCGGTA TTACTATCAA AGCGCAAAGC
GTTACGCTGA ACTACGAAGC GCGTGATGGT GAAACTTATC AGCTTAACTT CATCGATACT
CCGGGACACG TTGACTTCAC TTACGAAGTT TCTCGCTCAC TTGCAGCCTG CGAAGGTGCG
CTTTTGGTCG TCGACGCGGG GCAAGGCGTA GAAGCCCAGA CACTGGCTAA CTGCTACACG
GCTATTGAAA TGGACATGGA AGTGGTTCCA GTGTTGAACA AAATTGACCT GCCACAGGCC
GAACCAGACC GCGTGGCCGA AGAGATTGAA GACATTGTTG GTATAGATGC TCTTGACGCC
GTGCGCTGCT CGGCGAAAAC CGGAATTGGT ATTGAAGATG TCCTTGAAGT TATCGTCAAT
AAGATTCCAC CGCCAGAAGG CGATCGAGAA GCGCCACTTA AAGCGCTAAT TATCGACTCG
TGGTTCGACA ACTATCAGGG CGTTGTATCA TTAGTACGTA TTGTCGAAGG CCAATTGAAC
AAGAAAGATA AAATTCAAAT TATGTCGAAT GGCCAAACTC ACCAAGTGGA CAAAATCGGT
GTGTTTACGC CTAAGCCTCT TGATACTGGC ATATTAAGGG CAGGTGAAGT TGGTTTTATC
ATTGCCGGCA TCAAAGATAT TCAAGGTGCG CCCGTGGGGG ATACTATCAC GCTTGCGCGC
GAGCCTGCTG ACGCCATGCT TCCTGGTTTC AAAAAGGTTA AGCCACAGGT TTATGCGGGT
ATATTCCCAA TTAGTTCAGA TGATTACGAA GACTTCCGTG ATGCCCTTGC TAAGTTAAGC
CTGAACGACG CGTCATTATT CTACGAGCCA GAAAGTTCAG CCGCCTTGGG TTTTGGTTTC
CGTATCGGCT TCCTTGGCAT GCTGCACATG GAAATCATTC AAGAGCGTTT AGAGCGTGAA
TATGACCTAG GTCTTATTAC TACTGCACCT ACGGTAATTT ACGAAGTCGA AACGACAAAG
GGCGAGACAC TTACCGTAGA TAGCCCGGCG AAATTACCGC CGGTTAACGA TATTGCTGAA
ATTCGTGAAC CTATGGTTGA AGCCAATATT CTCGTACCAC AAGAGTATTT AGGTAACGTA
ATTACTCTAT GTGTTGAAAA GCGCGGTATG CAAACCAACA TGACGTACCA CGGTAAGCAA
GTCGCGGTAA CTTACGAGCT ACCAATGGCT GAAGTTGTTC TCGATTTCTT CGACCGTTTG
AAGTCTACCA GCCGTGGTTT CGCTTCCCTT GATTATAACT TTAAGCGTTT CCAAACGTCT
GACATGGTGC GCGTTGATAT TCTTATAAAC GGCGAACGCG TAGATGCGCT AGCGGTTATT
ACGCACAGAG AAAATTCTCA GGGCCGTGGT CGTGAGTTGG TAGAAAAATT ACGTGAATTG
ATTCCTCGCC AAATGTTCGA TATCGCTATT CAGGCTGCGA TTGGTAATCA CGTCGTTGCA
AGAAGTACGG TTAAGCAGCT GCGTAAAAAC GTAATCGCCA AGTGTTATGG TGGTGACGTT
AGTCGTAAGA AAAAGCTACT TCAAAAGCAG AAAGAAGGTA AAAAGCGAAT GAAGCAAGTG
GGTAATGTTG AGTTGCCACA AGATGCATTC CTTGCAGTAT TGAAGGTGGG CAAATAA
 
Protein sequence
MQQSHIRNFS IIAHIDHGKS TLSDRLIQHC GGLTDREMAE QVLDSMDLEK ERGITIKAQS 
VTLNYEARDG ETYQLNFIDT PGHVDFTYEV SRSLAACEGA LLVVDAGQGV EAQTLANCYT
AIEMDMEVVP VLNKIDLPQA EPDRVAEEIE DIVGIDALDA VRCSAKTGIG IEDVLEVIVN
KIPPPEGDRE APLKALIIDS WFDNYQGVVS LVRIVEGQLN KKDKIQIMSN GQTHQVDKIG
VFTPKPLDTG ILRAGEVGFI IAGIKDIQGA PVGDTITLAR EPADAMLPGF KKVKPQVYAG
IFPISSDDYE DFRDALAKLS LNDASLFYEP ESSAALGFGF RIGFLGMLHM EIIQERLERE
YDLGLITTAP TVIYEVETTK GETLTVDSPA KLPPVNDIAE IREPMVEANI LVPQEYLGNV
ITLCVEKRGM QTNMTYHGKQ VAVTYELPMA EVVLDFFDRL KSTSRGFASL DYNFKRFQTS
DMVRVDILIN GERVDALAVI THRENSQGRG RELVEKLREL IPRQMFDIAI QAAIGNHVVA
RSTVKQLRKN VIAKCYGGDV SRKKKLLQKQ KEGKKRMKQV GNVELPQDAF LAVLKVGK