Gene MADE_02984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02984 
Symbol 
ID6778984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand- 
Start bp3236852 
End bp3237892 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content45% 
IMG OID642756435 
ProductATP-dependent protease ATP-binding subunit 
Protein accessionYP_002127274 
Protein GI196157785 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1219] ATP-dependent protease Clp, ATPase subunit 
TIGRFAM ID[TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000600418 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATA AGCAAAGCGG TGACGGTGAT AATAAGCTAC TGTACTGTTC GTTTTGTGGC 
AAAAGCCAAC ACGAAGTAAG AAAGTTAATA GCAGGCCCGT CGGTATTTAT TTGCGACGAG 
TGTGTTGAGT TATGTAACGA TATCATTCGC GAAGAAATTA AGGAAATCGC GCCTAAGCAA 
AAGCAGGACG CTTTACCCAA ACCAACCGAA ATTCATGCAC ATCTTGACGA TTACGTAATT 
GGGCAAGAAC ACGCGAAGAA GGTACTATCA GTAGCGGTTT ACAACCACTA CAAGCGTTTG 
CGCAATGGCG ATGTTCACGA AGGCGTTGAA TTAGGCAAAA GTAATATTTT GCTTATAGGC 
CCAACAGGCA GCGGTAAAAC GCTGCTTGCT GAAACCTTAG CGCGTTTACT TGACGTTCCA 
TTTACTATGG CTGACGCCAC CACGCTTACC GAAGCGGGTT ATGTAGGTGA AGATGTTGAG 
AACATTATTC AGAAGCTGCT TCAGAAGTGC GACTACGATG TAGAAAAAGC CCAAAGGGGT 
ATTGTCTACA TCGATGAAAT CGACAAGATT TCTCGTAAGT CTGACAATCC TTCTATTACT 
CGAGATGTAT CGGGTGAAGG TGTGCAGCAG GCGCTACTTA AGCTAATTGA AGGTACCGTG 
GCCTCAGTGC CTCCGCAAGG CGGCCGTAAG CATCCACAGC AGGAGTTTTT GCAGGTTGAT 
ACCTCTAAGA TCCTATTTAT CTGTGGTGGT GCATTTGCAG GGCTTGATAA AGTTATCGAG 
CAACGCGCAC AAAAAGACAC AGGCATCGGT TTTGGCGCTA CGGTCAAGTC GAAAGACAAC 
AGCAAACAAA TCAGCGAACT CTTTAAGCAG GTTGAGCCCG AAGATTTGGT TAAATATGGC 
TTGATACCAG AGTTCATTGG CCGTTTACCT GTTGTAACCA GCCTTGAAGA GTTAAATGAA 
GACGCACTAA TTCAAATTCT ACGTGAGCCT AAGAACGCAA TTACCAAGCA ATATGGTGCA 
TTGTTCTCGA TGGAGATGTA G
 
Protein sequence
MSDKQSGDGD NKLLYCSFCG KSQHEVRKLI AGPSVFICDE CVELCNDIIR EEIKEIAPKQ 
KQDALPKPTE IHAHLDDYVI GQEHAKKVLS VAVYNHYKRL RNGDVHEGVE LGKSNILLIG 
PTGSGKTLLA ETLARLLDVP FTMADATTLT EAGYVGEDVE NIIQKLLQKC DYDVEKAQRG 
IVYIDEIDKI SRKSDNPSIT RDVSGEGVQQ ALLKLIEGTV ASVPPQGGRK HPQQEFLQVD 
TSKILFICGG AFAGLDKVIE QRAQKDTGIG FGATVKSKDN SKQISELFKQ VEPEDLVKYG 
LIPEFIGRLP VVTSLEELNE DALIQILREP KNAITKQYGA LFSMEM