| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02955 |
|---|
| Symbol | |
|---|
| ID | 6777759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 3204517 |
|---|
| End bp | 3204903 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 642756404 |
|---|
| Product | Hg(II)-responsive transcriptional regulator |
|---|
| Protein accession | YP_002127245 |
|---|
| Protein GI | 196157756 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02051] Hg(II)-responsive transcriptional regulator |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0202543 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACGAA GTATCAGCAA AGTTGCCAAA GAGCTCGATA TAAACGTTGA AACAGTTCGA
TTTTATGAGC GTAGAGGCTT AATTCTGCAA CCGACTAAAC CCGAAGTGGG ATACCGCCAC
TATCCCGATG ACACAGTGAG TCGAATTCGC TTTATCAAAC GCGCACAAGT GCTTGGATTT
ACGCTAGATG AAATTGCCAA CCTCTTGAGT TTGAATGATC ACCCATGTGG ACAGGTTCAA
GAGCTTGCAG AATATAAGTT GAGCACCGTC AAAGAAAAGA TGGCAGACCT GAAACGGTTA
GAAAGTGCGC TAATGGAGTT ATTAACACAA TGTAATAGCA ATGACGATGA TAGTTATTGT
CCTATTATCG ACTCCCTACA ACCCTAG
|
|---|
| Protein sequence | MTRSISKVAK ELDINVETVR FYERRGLILQ PTKPEVGYRH YPDDTVSRIR FIKRAQVLGF
TLDEIANLLS LNDHPCGQVQ ELAEYKLSTV KEKMADLKRL ESALMELLTQ CNSNDDDSYC
PIIDSLQP
|
|---|
| |