Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02883 |
Symbol | |
ID | 6777078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3132582 |
End bp | 3134888 |
Gene Length | 2307 bp |
Protein Length | 768 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642756332 |
Product | polar flagellar hook-length control protein FliK |
Protein accession | YP_002127173 |
Protein GI | 196157684 |
COG category | [N] Cell motility |
COG ID | [COG3144] Flagellar hook-length control protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0438685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACAAG TTGCCGCACA AAAAACAGAC ATTGCCGCAT TACCCTTTTC TGCCTCTAGC ACAGCAAAAG CAGTAGAGAC TGGAATCGGT TCACAACAAG ATGCTAATAG CGAAAATAAT CAGGCATTTA ATCGACTTTA TCAAGATGCT AAAGCTTCGC GCTCAGACTT CGTGCTTAAT GATAAGTCGA GTCAAACTCC GAGCAGCCGA GCTCAAGACC GAGCTGCTTC TGAACAAATG GCTAAAAGCG CAAAAGATAA AGACGCCGGC CATACGGACC TACCCGATAA TCACCGAGCG ACCGACCGGG CAGACGAATA CGATAGCAGC GCACAAGCCA CTGAGGCAGA GGCGCAACAA GGTCGCGTTC GATCAGAAAT TGAAGATACT CGGGAAACCC AAAAGCGTGA ACTTGCGCAG CAGCTTGTCG CTGATGGCGA GGCAGTGGAA CAGCGCAGCG TTACCGAGGC TAAGTTTGTT TTAGGCGAAG GCGGTAAAAA AGATGCTGAA GCTGGGGTAA TTACCACTCC TGGAACGCCG GATGCAAAAC CCATTAAAGA AGACGAGGCT GAGCCTGATT GGATTGCCTA TGTTGAAACC GTGGTAAACG GTATGGCAAA GGGTGAGCAG CAAAGTGACA ATAATAAGGG TAATACACCC ACTAGCCAGG TTGCCGAGTT AGTCGAGGAT AACGTTGATG TGCTGTCGGT TAATGAGGCG GGGAAGCTTT GGAAACTGCC TGAAAACGTA GACGCTAGCG ATGCGCCTTC TTTACTTGCA CACTTTCTTA CGCAGCTAAA TAGCGAGGGT GAAGCTAGCT TAGAAAAATT TTCCGATAGC GCCCTGTCAC ATGAAGCAAA GCAAACGCTT AGTGCGTTAG CTTCCCTGTT ATCTAAGCAA AGTAGTGAAG GCGAACACAA CGGTAGTGAC ACGTCATTTG AACCGTCAAC AATTCAACAG TTTTCAACTG ACGGTGAAGC AGAAAGTGAA GATAGCCTTT CGGCACTTTT GGCGAAGCTC ATGGAAAGTA GCAGTGCTGA AGAGACAAGT AAGCCTGTTG ATGCAGGCGC ACTTGCATCT AACGAGCTAG ATGCCGAAGC CCTTGATTTA AAAGAACTTG GAACGGACGA GCTAGATGCC GAAGCTCTTG ATTTAAAAGA ACTTGCAACG GACGAGTCGT TAATTTTAAG TTTGATCGCC GATGAACTTA ATAACGTGCA AGAAGAGGGC GCTGAAGAAA GCGAGGCGTT AATTGATGAA ACCCTTACAG AGTTAGCTAG CGATCCTACC ATCACGCAAG GTGTTAATGG TAGCGTCATT AGTCGCGGTG AAACTAACAG TGCCAACGCT GCCAATGCAG CAGGCGTATC AGCTCAATCA AGTACAAATG TGCAAAGCGC TGTGATAGAT CAGTCTCAGC AAGCGACAGA AATACCATCT GACTTGCTAA CGGCTATCAG TGAGCTTTCG CCTCAAAGTG CACAGAAAGC AACAGAAGCC TTCGCAGAAC GCATGGTTGC AACCATGCCC AGCGGTCAAC AGCAACAGGC CGTTAAGGCG AATATCATAG CCGGTATTAA TGAATTTCAG CAGCAAGTTG AGCAGGGCAT AGAGCCGGGT ATTGACTTAA GTGGTATCGT GGCTGACGCG GCAAAAGACG CGGCGGTGAG TACTGAAATG GTGGCATCTA TGACTGCCAA AGTAGATAGT CAGGCGAGTC AGTTTTTAAA CTTAATGTCG CAGACACAAG CAAGTGCACA ACACGCTATT TTAGGTCTAG TGGCGCAAAC TGACACCGTT ATGCAGGAAA ATAGTCAGCT TCGCGCTGAA GCGTCAAAAA CTCAGCAGCA ATTTGAAGGC TTTGATAAAG CGGTCAATAT TCATAAAAGC GAAGGACAGC AACAGCTTAA CGAGAAAATT CGCTGGATGG TTAATGCTAG AAACACGATG GCAGAAATTC GTTTAGACCC GCCTGAGCTT GGCAGTATGC AGGTTCGCGT TAACGTTGCG GGAGACGCCG CAAGCGTTAG CTTTGTGGTG CAGTCACAGC AAGCAAAAGA CGCACTGGCA GAGGCCATGC CGAAACTGAG AGATATGCTG TCAGAGCAGG GCATTGAGTT AGGTGATGCT GAAGTGCGAA AAGATAACTC GTCGAACAAT GAACATGGCC AGCAACTTGC AGGAGAGGCT AATCAAGGCC GTGGCGAGCG TGGAGAAAAT GACGGCCTAG ATGAAATGGA AGGTACACGT GTTATTGAAC AGCCCGTTAC GCGTGCAGCG AAAGGCGGTA TCGATTTTTA TGCGTAG
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Protein sequence | MQQVAAQKTD IAALPFSASS TAKAVETGIG SQQDANSENN QAFNRLYQDA KASRSDFVLN DKSSQTPSSR AQDRAASEQM AKSAKDKDAG HTDLPDNHRA TDRADEYDSS AQATEAEAQQ GRVRSEIEDT RETQKRELAQ QLVADGEAVE QRSVTEAKFV LGEGGKKDAE AGVITTPGTP DAKPIKEDEA EPDWIAYVET VVNGMAKGEQ QSDNNKGNTP TSQVAELVED NVDVLSVNEA GKLWKLPENV DASDAPSLLA HFLTQLNSEG EASLEKFSDS ALSHEAKQTL SALASLLSKQ SSEGEHNGSD TSFEPSTIQQ FSTDGEAESE DSLSALLAKL MESSSAEETS KPVDAGALAS NELDAEALDL KELGTDELDA EALDLKELAT DESLILSLIA DELNNVQEEG AEESEALIDE TLTELASDPT ITQGVNGSVI SRGETNSANA ANAAGVSAQS STNVQSAVID QSQQATEIPS DLLTAISELS PQSAQKATEA FAERMVATMP SGQQQQAVKA NIIAGINEFQ QQVEQGIEPG IDLSGIVADA AKDAAVSTEM VASMTAKVDS QASQFLNLMS QTQASAQHAI LGLVAQTDTV MQENSQLRAE ASKTQQQFEG FDKAVNIHKS EGQQQLNEKI RWMVNARNTM AEIRLDPPEL GSMQVRVNVA GDAASVSFVV QSQQAKDALA EAMPKLRDML SEQGIELGDA EVRKDNSSNN EHGQQLAGEA NQGRGERGEN DGLDEMEGTR VIEQPVTRAA KGGIDFYA
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