Gene MADE_02880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02880 
SymbolfliM 
ID6775508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3130735 
End bp3131793 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content46% 
IMG OID642756329 
Productflagellar motor switch protein FliM 
Protein accessionYP_002127170 
Protein GI196157681 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGATT TATTATCTCA AGATGAAATC GATGCCCTAT TACACGGGGT AGATGATGTA 
GAAGAGGAAG AGGTTGGCGA TAGCGACTCT GATGCTTCTA CGCTCGAGTA CGACTTCTCC
TCGCAAGACA GAATTGTGCG TGGGCGAATG CCTACGCTCG AAATTGTGAA TGAACGCTTC
GCGCGCCATA TGCGGGTGAG TTTATTCAAC ATGATGCGCC GCTCTGCTGA AGTATCGATT
AACGGTATTC AAATGATTAA GTTCGGCGAA TACATCCATA CGTTATTTGT TCCGACCAGC
CTAAATATGG TGCGCTTCCG TCCCCTTAAG GGAACTGGGC TCATTACCAT GGAAGCGCGT
CTTGTTTTTA TTTTGGTAGA CAACTTCTTT GGTGGCGATG GCCGCTATCA TGCAAAAATC
GAAGGCCGAG AATTCACGCC TACGGAACGT CGTATTATTC AGATGCTGCT TAAAATCATT
TTCGAAGATT ATAAAGAAGC ATGGGCGCCG GTCATGGACG TGTCTTTCGA ATACTTAGAT
TCGGAAGTCA ACCCGGCAAT GGCAAACATT GTAAGCCCCA CCGAAGTAGT GGTTATCAGC
TCGTTTCATA TAGAGTTAGA CGGTGGTGGT GGCGACTTCC ACGTGTCGTT GCCATACTCA
ATGCTAGAAC CGATACGCGA ACTGCTAGAC GCCGGTGTTC AAAGCGATAA AGAAGATACG
GACTTGCGCT GGAGCAAAGC GCTTCGCGAC GAAATTATGG ATGTGAAAGT GGCATTAACT
ACCCACATGT TGGATGTCGA TGTGCCTTTA CGCGATGTGA TGGAGTTTAA GCCAGGCGAT
ATAATTCCGG TGGAAATGCC TGAAACTATC ACAGTGCTAA TCGAAGATTT ACCTACGTTT
AGGGCTAAGT TAGGCCGAAG CCGAGATAAC TTGGCGCTTA AAATAGTAGA AAAAATTGCA
AGACCGACTT CAGTGAAGTC TGAGCTACAG TTATTAACCC GCGGTGGGCG CATTATAGAT
AATGACGCAG AACTGCAAGT ACTCGAAGAA GACCTGTAA
 
Protein sequence
MSDLLSQDEI DALLHGVDDV EEEEVGDSDS DASTLEYDFS SQDRIVRGRM PTLEIVNERF 
ARHMRVSLFN MMRRSAEVSI NGIQMIKFGE YIHTLFVPTS LNMVRFRPLK GTGLITMEAR
LVFILVDNFF GGDGRYHAKI EGREFTPTER RIIQMLLKII FEDYKEAWAP VMDVSFEYLD
SEVNPAMANI VSPTEVVVIS SFHIELDGGG GDFHVSLPYS MLEPIRELLD AGVQSDKEDT
DLRWSKALRD EIMDVKVALT THMLDVDVPL RDVMEFKPGD IIPVEMPETI TVLIEDLPTF
RAKLGRSRDN LALKIVEKIA RPTSVKSELQ LLTRGGRIID NDAELQVLEE DL