Gene MADE_02861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02861 
Symbol 
ID6775573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3113085 
End bp3114023 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content47% 
IMG OID642756310 
Producthomoserine O-succinyltransferase 
Protein accessionYP_002127151 
Protein GI196157662 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1897] Homoserine trans-succinylase 
TIGRFAM ID[TIGR01001] homoserine O-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATTC GTATTCCTGA GCAGTTACCC GCACAGAATG TACTACTAGG TGAAAACATT 
TTTACCATGG ACATGGACAG GGCGGCTAAC CAGGATATTC GTCCTCTTGA AGTGGGTATT
TTAAATTTAA TGCCGAATAA AATTGAGACA GAAGTGCAAC TGCTGCGTCT GCTCTCAAAC
ACGCCACTAC AGATAAATGT GGATTTGATC CGCATAGACA ACCAGGCGCC CAAGAATACA
CCCCAGTCGC ACATGGACGC TTTCTACCAT GACTTTTCGT CGGTGGTGAA CAAAAAGTAT
GATGGCCTTA TTGTTACCGG CGCCCCATTA GCGCTTATCG ATTACGAAGA AGTGAAATAC
TGGGAAACCA TGACCACTAT TTTGGAGTGG GCGCAGCGCC ACGTAAATTC GACGCTTTAT
CTGTGTTGGG CGGCCCATGC AGCCATGTAT CACTTTTACG GCATTACCCG CGAACTGCGA
GATGAAAAGT TTTCAGGGGT GTTTAAGCAC AAAGTTAACG ATCCAAATAA TGAGTTATTA
AGAGGCTTTG ATCCGTCATT CTATGCCCCC CATTCACGCT ACGGGCATAT CGATACTTCG
TTGTACAACA GTGTTGACGG GCTTAACGTG GTCGCAGAGT CTGATGAGGT AGGCGCCTAT
ATTGTCGCCT CTGAAGACAA GCGCATGGTA TTTGTTACCG GCCACCCAGA ATACGACCCT
GATACACTAA AAGACGAGTA TTTACGCGAC ATTGCTGCCG GCCAAACACC GCCCATTCCG
AAAAATTATT TTGAAGGAGA CGACCCAGCC ACGTCTCCCA TTGTACAGTG GCGGTCGCAC
GGCAGCCTAT TGTTTACAAA CTGGCTGAAT TATTATGTTT ATCAGACCAC GCCTTACGAT
TTAAGTCAGC TTGCTGAAAA GTCACAGCCA AAGAGGTAG
 
Protein sequence
MPIRIPEQLP AQNVLLGENI FTMDMDRAAN QDIRPLEVGI LNLMPNKIET EVQLLRLLSN 
TPLQINVDLI RIDNQAPKNT PQSHMDAFYH DFSSVVNKKY DGLIVTGAPL ALIDYEEVKY
WETMTTILEW AQRHVNSTLY LCWAAHAAMY HFYGITRELR DEKFSGVFKH KVNDPNNELL
RGFDPSFYAP HSRYGHIDTS LYNSVDGLNV VAESDEVGAY IVASEDKRMV FVTGHPEYDP
DTLKDEYLRD IAAGQTPPIP KNYFEGDDPA TSPIVQWRSH GSLLFTNWLN YYVYQTTPYD
LSQLAEKSQP KR