Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02861 |
Symbol | |
ID | 6775573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3113085 |
End bp | 3114023 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642756310 |
Product | homoserine O-succinyltransferase |
Protein accession | YP_002127151 |
Protein GI | 196157662 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1897] Homoserine trans-succinylase |
TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAATTC GTATTCCTGA GCAGTTACCC GCACAGAATG TACTACTAGG TGAAAACATT TTTACCATGG ACATGGACAG GGCGGCTAAC CAGGATATTC GTCCTCTTGA AGTGGGTATT TTAAATTTAA TGCCGAATAA AATTGAGACA GAAGTGCAAC TGCTGCGTCT GCTCTCAAAC ACGCCACTAC AGATAAATGT GGATTTGATC CGCATAGACA ACCAGGCGCC CAAGAATACA CCCCAGTCGC ACATGGACGC TTTCTACCAT GACTTTTCGT CGGTGGTGAA CAAAAAGTAT GATGGCCTTA TTGTTACCGG CGCCCCATTA GCGCTTATCG ATTACGAAGA AGTGAAATAC TGGGAAACCA TGACCACTAT TTTGGAGTGG GCGCAGCGCC ACGTAAATTC GACGCTTTAT CTGTGTTGGG CGGCCCATGC AGCCATGTAT CACTTTTACG GCATTACCCG CGAACTGCGA GATGAAAAGT TTTCAGGGGT GTTTAAGCAC AAAGTTAACG ATCCAAATAA TGAGTTATTA AGAGGCTTTG ATCCGTCATT CTATGCCCCC CATTCACGCT ACGGGCATAT CGATACTTCG TTGTACAACA GTGTTGACGG GCTTAACGTG GTCGCAGAGT CTGATGAGGT AGGCGCCTAT ATTGTCGCCT CTGAAGACAA GCGCATGGTA TTTGTTACCG GCCACCCAGA ATACGACCCT GATACACTAA AAGACGAGTA TTTACGCGAC ATTGCTGCCG GCCAAACACC GCCCATTCCG AAAAATTATT TTGAAGGAGA CGACCCAGCC ACGTCTCCCA TTGTACAGTG GCGGTCGCAC GGCAGCCTAT TGTTTACAAA CTGGCTGAAT TATTATGTTT ATCAGACCAC GCCTTACGAT TTAAGTCAGC TTGCTGAAAA GTCACAGCCA AAGAGGTAG
|
Protein sequence | MPIRIPEQLP AQNVLLGENI FTMDMDRAAN QDIRPLEVGI LNLMPNKIET EVQLLRLLSN TPLQINVDLI RIDNQAPKNT PQSHMDAFYH DFSSVVNKKY DGLIVTGAPL ALIDYEEVKY WETMTTILEW AQRHVNSTLY LCWAAHAAMY HFYGITRELR DEKFSGVFKH KVNDPNNELL RGFDPSFYAP HSRYGHIDTS LYNSVDGLNV VAESDEVGAY IVASEDKRMV FVTGHPEYDP DTLKDEYLRD IAAGQTPPIP KNYFEGDDPA TSPIVQWRSH GSLLFTNWLN YYVYQTTPYD LSQLAEKSQP KR
|
| |