Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02849 |
Symbol | |
ID | 6777524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 3098502 |
End bp | 3100589 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642756298 |
Product | putative peptidase M13 family protein |
Protein accession | YP_002127139 |
Protein GI | 196157650 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3590] Predicted metalloendopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.535819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATATA AACTTTTAGC CGTAGCTATT GCGGCTTCGC TAGGGCTTAC AGGCTGTGGC CAGCCTGACC AAGCAAAAGA ACAAACAAAC GATCAGGTAA GCGCAGTTGA AGCGCCTGAA GCAAACGACG AAGCTGAGCT TGGCTCTTTT GGCGTAGACT TATCTGCACG CAACGAAGCA GTAAAACCGG GTGATGACTT CTTCATGTAT GCAAGCGGCA CATGGTATGA CAACTATGAA CTGCCAGCAG ACAAAACCCG TTATGGTGCT TTCACTGGTC TTGCTGAGCG AAGTGAAGAG CAGGTGAAAA ACATCATTGA TGGTTTAATG GAGAAGTCTT CGCTTAACGC TGAAGAGCAG CTTGTTCACG ACTTTTTCGT TGCATACATG GACACAGATA CTATTAACGA AAAAGGTATT AAGCCCATTG AAGACGTACT GACGTCAATT AATAGTATTG AAAACACCAC CGACCTTACT AAGGCGTTCG GCAATAGCTG GCTTGTTGGT TCAAGCACGC CAATCTACGG CGGAATGTGG TACAACCGCT TAGACCCCAA CGAATATCAA CTAAGCGTGG GTGTAGGCGG TTTGGGCCTT CCTGATCGCG ACTATTACCT TAGCGACAGC GAGCGCTTTG TTAAAATTCG CGAAGCTTAT GTAGCTCACA TCGAGCAAAT GCTTAACTTT GCTGGAGAGG AAAATGCGGC GGAAAAAGCA CAAAATATTC TTCAGCTTGA AACACAAATT GCTCAAATAC AGTGGCCACG GGAAAAGCGT CGTGATCGCG ACCTAACGCT TAACCAAATT GAGCGCAGTA AATTATCTGA TGAATACCCG GGTTTTGACT GGGATACTTA CTTCGCACAG ACCGGTTATA AAGTCCCTGA GCTCAATATC ACGCAGCCAG AGCCAGTCAA AGAAGTGATT AAAATTATCA ATGAAGCTGA CTTAGCGGAT TGGAAGTCGT ATTTGAAATA TCATACGATT TCTAACAACG CAGGCTTCCT TTCAGAAGAA ATTTACCTTG CTAACTTTGA CTTCTTCGGA CGCACGTTAA GTGGTCAGCA AGAGCCTCGC CCTCGCTGGA AGCGCGCGGT AAGCCAGATG TCTGGTACTG AATCACTCGG TTTTGCTATC GGCAAAATCT ACGTGAATGA GTATTTCCCG GAAAGCTCTA AAGAGCAAAT GGCGGAACTG GTAGAAAACC TGCGTACTGC ACTCGGTGAG CGTATTGAAA ACCTTGACTG GATGAGTGAA GAAACCAAGG TTAACGCCAA AGAAAAGTTG ATGGCCTTTA ACCCAAAAAT TGGTTACCCA GATGAATGGC AGCTTTTTGA CGGCGTGACT ATTAGCGATA AAGACCTAGT GGGTAACGTT CGCAATCTAC GCACGTTCTT CCAAGACCAA TCGGTTGAGC GCGAGCTTGA GAAAACAGAC CGCAATCGCT GGGGCATGAC ACCTCAGCGC GTTAACGCTT ACTACAATAG CTCGTTCAAT GAAATTGTAT TCCCTGCAGC TATTTTGCAG CCGCCGTTCT TCGATCCTAA TGCCGATCCA GCCGTTAACT ACGGTGCTAT TGGCGCAGTT ATTGGTCATG AGATGGGCCA TGGCTTCGAC GACCAAGGGT CAAAATCTGA CGCTAACGGA ATTCAGCGCA ATTGGTGGAC CGACGCAGAC CGCGCAGCGT TTGAAGAAAA AGCAGACATG CTGGCTGAAC AATACAGTCA ATACGAGCCA ATTGAAGGTA ACTTCGTGAA CGGCCGCAAC AGTCTAGGTG AGAACATCGG CGATGTGGGT GGTCTGTCTA TGGCTTACCA CGCTTACAAA CTAAGCCTGA ACGGTAAAGA AGCACCCGTT ATTGATGGTC TAACCGGCGA TCAACGCTTT TTCCTGGCAT GGGCACAAGT GTGGAAAGAA AAACGCACCG AAGAGAGCAT GCTTAACCAG CTACGTGCCG GTACACACGC TCCAGGTCGC TACCGTGCTC AAGCACCGCG CAATCACGAT GCTTGGTATG AAGCATTCGA CGTAAAACCA GGTGATGCTT TGTATCTTCC ACCAGAAAAG CGCGTAAGAA TCTGGTAA
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Protein sequence | MKYKLLAVAI AASLGLTGCG QPDQAKEQTN DQVSAVEAPE ANDEAELGSF GVDLSARNEA VKPGDDFFMY ASGTWYDNYE LPADKTRYGA FTGLAERSEE QVKNIIDGLM EKSSLNAEEQ LVHDFFVAYM DTDTINEKGI KPIEDVLTSI NSIENTTDLT KAFGNSWLVG SSTPIYGGMW YNRLDPNEYQ LSVGVGGLGL PDRDYYLSDS ERFVKIREAY VAHIEQMLNF AGEENAAEKA QNILQLETQI AQIQWPREKR RDRDLTLNQI ERSKLSDEYP GFDWDTYFAQ TGYKVPELNI TQPEPVKEVI KIINEADLAD WKSYLKYHTI SNNAGFLSEE IYLANFDFFG RTLSGQQEPR PRWKRAVSQM SGTESLGFAI GKIYVNEYFP ESSKEQMAEL VENLRTALGE RIENLDWMSE ETKVNAKEKL MAFNPKIGYP DEWQLFDGVT ISDKDLVGNV RNLRTFFQDQ SVERELEKTD RNRWGMTPQR VNAYYNSSFN EIVFPAAILQ PPFFDPNADP AVNYGAIGAV IGHEMGHGFD DQGSKSDANG IQRNWWTDAD RAAFEEKADM LAEQYSQYEP IEGNFVNGRN SLGENIGDVG GLSMAYHAYK LSLNGKEAPV IDGLTGDQRF FLAWAQVWKE KRTEESMLNQ LRAGTHAPGR YRAQAPRNHD AWYEAFDVKP GDALYLPPEK RVRIW
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