Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02845 |
Symbol | |
ID | 6777756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 3093375 |
End bp | 3093566 |
Gene Length | 192 bp |
Protein Length | 63 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642756294 |
Product | carbon storage regulator |
Protein accession | YP_002127135 |
Protein GI | 196157646 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000287384 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTATTT TGACTCGTCG AGTTGGTGAA ACACTTATGG TAGGTGACGA TGTAACCGTT ACTGTACTAG GTGTAAAAGG GAATCAGGTA CGTATAGGTG TGAATGCACC AAAAGAAGTT TCTGTGCACC GTGAAGAGAT TTATATGCGC ATTCAGGCAG AAAAAGGCGG TCAGCCAGGT TCTGCAGAAT AA
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Protein sequence | MLILTRRVGE TLMVGDDVTV TVLGVKGNQV RIGVNAPKEV SVHREEIYMR IQAEKGGQPG SAE
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