Gene MADE_02838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02838 
Symbol 
ID6775788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp3087229 
End bp3088224 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content48% 
IMG OID642756285 
Productputative peptide ABC transporter, ATP-binding protein 
Protein accessionYP_002127128 
Protein GI196157639 
COG category[V] Defense mechanisms 
COG ID[COG4170] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATGC TTGATATTAA AAATCTCACC TTAGAAATGC AAAGTAGTGA AGGCGCTATC 
AAAGCACTGG ATAAAGTTAA CTTATCTGTA AGTAGCGGCG AAATTCGTGC CCTTGTGGGT 
GAGTCTGGTT CGGGTAAAAG TTTAATTGTT TCTGCTATCT GCGGCGCACT ACCCAATCAA 
TGGAATTTGA CGGCCGACAG GATGAGTTGG AACGGTGAAA ACTTATTAGG TATGTCGGTG 
CAACAGCGCC GCGAAGTAAT GCGTCGAGAA ATTGCCGTTG TATTCCAAGA TCCTCAGGCG 
AGCTTAGACC CATCGGCAAC CCTTGGCGAA CAGCTAGAGG AAAGTATCCC TGATGAGTTT 
GTTCAAGGAA GCTGGTTTTG GCAGCGTGCA CAGCAGCGTA AAAAGATAGC CATTAGTACG 
GTGCATAAAG TGGGTATAAA GCACCACAAA CATTACTTAA GTGCGTTTCC ACACCAAATA 
CCTGCCGACA TTGGGCAGAA GTTTATGATT GCAATGGCGT TAGTATCACA GCCTAAATTA 
TTGATTGCTG ATGATCCAAC TCGCGGTATG GAGCCCACCA CTAAAACACA AATTCTTAAG 
CTTTTTACTC GGCTAAACCA AACGCGTTCG TTATCTATTC TTTTCGTGAG CCACGACTTG 
CTGGCAATTG CGAGTATGTC ACACTCGATG ACGGTTCTAT ATGCCGGTCA GACCGTTGAG 
TCGGGTAAAA TGAAGCATAT CAAAAAGCGC CCGTTACATC CTTATACCAA AGCACTGCTG 
GACAGCGCGC CGAGCTTTAG GAAAGACTTG CCCCCTAAGT CACTGCTACC CACGCTCAGC 
GGCTCTATCC CAACGCTTCA GCATTTACCA ATTGGTTGCC GATTAGGCCC TAGATGCCCG 
CGAGCCCAGC GTGCCTGTGT GCAAACACCT GCCGTACGCA AAATTCATGA TCACAGCTAC 
AGCTGCCACT ACCCGCTGCA CATGGAGAAG CTGTGA
 
Protein sequence
MPMLDIKNLT LEMQSSEGAI KALDKVNLSV SSGEIRALVG ESGSGKSLIV SAICGALPNQ 
WNLTADRMSW NGENLLGMSV QQRREVMRRE IAVVFQDPQA SLDPSATLGE QLEESIPDEF 
VQGSWFWQRA QQRKKIAIST VHKVGIKHHK HYLSAFPHQI PADIGQKFMI AMALVSQPKL 
LIADDPTRGM EPTTKTQILK LFTRLNQTRS LSILFVSHDL LAIASMSHSM TVLYAGQTVE 
SGKMKHIKKR PLHPYTKALL DSAPSFRKDL PPKSLLPTLS GSIPTLQHLP IGCRLGPRCP 
RAQRACVQTP AVRKIHDHSY SCHYPLHMEK L