Gene MADE_02829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02829 
Symbol 
ID6775828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp3078033 
End bp3079589 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content45% 
IMG OID642756276 
ProductTranscriptional regulatory protein tyrR 
Protein accessionYP_002127119 
Protein GI196157630 
COG category[K] Transcription
[E] Amino acid transport and metabolism 
COG ID[COG3283] Transcriptional regulator of aromatic amino acids metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0448077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCTAG AAATCAGTTG TCAGGATCGT CTTGGTATTA CTCAAGATGT GTTAGATATT 
CTCGTAACCA AAGAAATAGA TTTACGCGGT ATAGAAATCG ATCCCGCGGG AAAAATTTTC
CTTAATTTTC CCAATATTGA ATTTGCCGAC TTCCAGCATC TCATGCCACA AATTCGCCGT
ATCGATGGTA TTGATGACGT GAAGACCACG CTTTTTATGC CTGGTGAACG TGAAAAGAAT
CAGCTTTCAG CAATTTTAAG AACGCTGCCT GACCCTGTTT TTTCCATTGA TGCCAAGGGA
AACATCGTGC TGTGCAACGA AGCGGTAAGC GCGGGCTTAG AAATGCCGAC TAGCGACATT
GAAGGCACAG AAATTAGTGA AGTCGTAAAA GGGTTTAACT TTACTAAGTG GATGGACGGT
AAATCGCCGG GCCCGCAGTC GTCAAAGGTT AAGTTTATTC AGCAAGATTA TCTTGCTGAT
ATGTTGCCTA TTACCGTACC TGACGGTGAT AAAAATATGA TTATGGCCGG TGCAGTGGTC
ATATTGAAAT CTGAAATGCG TTTGGGCCAG CAATTTACTG CTTTCCATCA GTCGCCTACG
GATAGTTTTG ACCGCTTTAT TGCGCAGTCA CCGTTTATGA AACGCGTGGT GCATGAAGCC
AAACGCATAG CCGATTTAGA TGCCCCTATT CTTATTTTTG GTGAGACGGG AACAGGGAAG
GAAATGATTG CGCGTGCGTG TCATCAATCT AGCCGTCGAA GTGAAGGTGC ATTTTTGGCA
CTAAACTGTG CGTCATTACC CGATAGCGTG GCGGAGACCG AGCTTTTTGG TTATGCGGCG
GGCGCGTTTA ATCAGCCGAA TGCTAAAGTG GGACTTTTAG AGCAGGCGAA AGGCGGCACC
CTGTTGCTCG ATGAAATTGC TGACATGTCG TCACAGCTTC AGGCTAAATT GCTACGGGTT
TTAGAAGACG GTGAATTTAG ACGCGTAGGC GATGCTGAGC CGGTTAAAGT GGACGTACGC
TTTATTTGCA CTACCTGCCG AGACTTAGGT CAGCTGGTTG AGGAGGGGCG ATTTAGAAAA
GAGCTCTATT ATCGCCTCAA TGTACTTAGC TTGGTCATGC CATCATTAAA AGACCGCAGG
CAAGATATCG TGCCCCTTGC CGAATCGTTT ATTGTGCAGC ATAGCACAAA ACTGGGAAGA
CGACCGGCGA AGCTTAGTAA GTCATGTGTC GACTTTCTGC AGCAGTATCC GTGGCCTGGT
AACGTAAGAC AGCTACAAAA TGCCCTTTAT CGCGCATTGT CGCTGCTGGA TGGTAAAGAA
ATTACTAAAG AAGATATTCA GCTTCCCAGC TGTGCACCTA GCGTAACCTA CATTGACGAG
AACTTTGAAG GTACCTTAGA TGAGGAAGTT AAAAAGTTTG AAAAAGACTT GCTAAAACGC
TTATACCCCT CTTATCCAAG TACCCGTCAG TTAGCGAAAA AGCTTGGTTT AAGCCACACG
GCGATTGCTA ACAAACTTCG TGAATACGGT ATTAATAAAG CAACCGTGAA GTTGTAA
 
Protein sequence
MRLEISCQDR LGITQDVLDI LVTKEIDLRG IEIDPAGKIF LNFPNIEFAD FQHLMPQIRR 
IDGIDDVKTT LFMPGEREKN QLSAILRTLP DPVFSIDAKG NIVLCNEAVS AGLEMPTSDI
EGTEISEVVK GFNFTKWMDG KSPGPQSSKV KFIQQDYLAD MLPITVPDGD KNMIMAGAVV
ILKSEMRLGQ QFTAFHQSPT DSFDRFIAQS PFMKRVVHEA KRIADLDAPI LIFGETGTGK
EMIARACHQS SRRSEGAFLA LNCASLPDSV AETELFGYAA GAFNQPNAKV GLLEQAKGGT
LLLDEIADMS SQLQAKLLRV LEDGEFRRVG DAEPVKVDVR FICTTCRDLG QLVEEGRFRK
ELYYRLNVLS LVMPSLKDRR QDIVPLAESF IVQHSTKLGR RPAKLSKSCV DFLQQYPWPG
NVRQLQNALY RALSLLDGKE ITKEDIQLPS CAPSVTYIDE NFEGTLDEEV KKFEKDLLKR
LYPSYPSTRQ LAKKLGLSHT AIANKLREYG INKATVKL