Gene MADE_02742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02742 
Symbol 
ID6778927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand+ 
Start bp2985992 
End bp2986624 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content50% 
IMG OID642756188 
Productribonuclease T 
Protein accessionYP_002127032 
Protein GI196157543 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR01298] ribonuclease T 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCCA ACCCGCCCCT TCTTTCCCAG CGCTTTAGAG GTTATTTCCC TGTAGTTATT 
GATGTTGAAA CTGCGGGCTT TAATGCGGGA ACCGACGCCT TGCTGGAGCT CGCGGCAGTT 
ACGGTAAAAA TGGATGACGA CGGCATTCTC CATCCCGATG AAACCTTTCA CTACCATATA 
GATCCGTTTG AGGGCGCTAA TCTAGAACCC GCAGCGTTGG AATTTAATGG CATCGATCCG 
AATTGCGCCT TGCGCGGGGC AATTGAAGAA AGTGAAGCCA TGAAGGACTT ATGCAAAGGT 
ATCCGAAAGG CGCAAAAAAA CGCTGGTTGT CAGCGCTCGG TGATTGTTGC CCACAACGCC 
ACTTTCGACC AGAGCTTTGT AAATGCGGCA ATAGAGCGTT GTAACATCAA ACGCACGCCG 
TTTCACCCGT TCGTCTCGTT TGATACCACC AGCCTTGCCG GCCTTGCGTT AGGGCAAACG 
GTGTTGGTTA AAGCCTGCCG CGCAGCGGGA ATCGCTTTTG ATCAAAGTGA AGCGCACAGC 
GCACTATACG ATGCCCAAAA AACAACCGAA CTATTTTGCT TTATGGTTAA CCGGTACAAA 
GCATTAGGCG GATGGCCGGT AGAAAATGAT TAA
 
Protein sequence
MSANPPLLSQ RFRGYFPVVI DVETAGFNAG TDALLELAAV TVKMDDDGIL HPDETFHYHI 
DPFEGANLEP AALEFNGIDP NCALRGAIEE SEAMKDLCKG IRKAQKNAGC QRSVIVAHNA 
TFDQSFVNAA IERCNIKRTP FHPFVSFDTT SLAGLALGQT VLVKACRAAG IAFDQSEAHS 
ALYDAQKTTE LFCFMVNRYK ALGGWPVEND