Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02734 |
Symbol | |
ID | 6776363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2978753 |
End bp | 2979445 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642756180 |
Product | NADH-ubiquinone oxidoreductase |
Protein accession | YP_002127024 |
Protein GI | 196157535 |
COG category | [C] Energy production and conversion |
COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGATT TTCGCGATTT ATCACTACAG GGGCTTTGGA AAAACAACCC TGCCCTCGTT CAGTTATTAG GCCTATGCCC CCTCTTAGCG GTTACGGCTA CGTTTATCAA TGGCTTAGGG TTAGGCCTTG CCACTATGCT GGTTTTAATT GGCAGCAACG TAACGGTATC GTTAGTGCGA AACGTGGTAC GAAATGAAAT TCGTATTCCC GTTTTCGTGA TGATCATAGC TGCGTTTGTC ACTATTGTTC AGTTGTTAAT GAACGCGTTC ACCTACGAAC TTTACCTGGC ATTAGGTATA TTCATCCCTT TGATTGTGAC TAACTGTGCC ATTATAGGTC GGGCAGAAGC GTTCGCCTCG AAAAATGGCC CGCTTGCATC GGCGTATGAC GGTCTAATGA TGGGGCTAGG CTTTACCGCA GTACTGGTTA TTCTCGGCGG CATGCGCGAA ATATTGGGCG CTGGCACACT GTTAACTGGC GCAGATCGTT TATTTGGCCC GATTGCTGAA AACTGGACCA TTGTGCTATT TAATACAGAA AATCCATTCT TACTTGCCGT ATTACCCCCT GGCGCCTTTT TAGGCATGGG CCTGTTAATT GCAATAAAAA ATAGTATCGA TGCCAAAATA GCGGCGCAGC AGACTGCCCC GACAGAAAAA GCAGCGCGTG TTCGGGTTAC AGCGGAAAGC TAA
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Protein sequence | MTDFRDLSLQ GLWKNNPALV QLLGLCPLLA VTATFINGLG LGLATMLVLI GSNVTVSLVR NVVRNEIRIP VFVMIIAAFV TIVQLLMNAF TYELYLALGI FIPLIVTNCA IIGRAEAFAS KNGPLASAYD GLMMGLGFTA VLVILGGMRE ILGAGTLLTG ADRLFGPIAE NWTIVLFNTE NPFLLAVLPP GAFLGMGLLI AIKNSIDAKI AAQQTAPTEK AARVRVTAES
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