Gene MADE_02734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02734 
Symbol 
ID6776363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2978753 
End bp2979445 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content47% 
IMG OID642756180 
ProductNADH-ubiquinone oxidoreductase 
Protein accessionYP_002127024 
Protein GI196157535 
COG category[C] Energy production and conversion 
COG ID[COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 
TIGRFAM ID[TIGR01948] electron transport complex, RnfABCDGE type, E subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATT TTCGCGATTT ATCACTACAG GGGCTTTGGA AAAACAACCC TGCCCTCGTT 
CAGTTATTAG GCCTATGCCC CCTCTTAGCG GTTACGGCTA CGTTTATCAA TGGCTTAGGG
TTAGGCCTTG CCACTATGCT GGTTTTAATT GGCAGCAACG TAACGGTATC GTTAGTGCGA
AACGTGGTAC GAAATGAAAT TCGTATTCCC GTTTTCGTGA TGATCATAGC TGCGTTTGTC
ACTATTGTTC AGTTGTTAAT GAACGCGTTC ACCTACGAAC TTTACCTGGC ATTAGGTATA
TTCATCCCTT TGATTGTGAC TAACTGTGCC ATTATAGGTC GGGCAGAAGC GTTCGCCTCG
AAAAATGGCC CGCTTGCATC GGCGTATGAC GGTCTAATGA TGGGGCTAGG CTTTACCGCA
GTACTGGTTA TTCTCGGCGG CATGCGCGAA ATATTGGGCG CTGGCACACT GTTAACTGGC
GCAGATCGTT TATTTGGCCC GATTGCTGAA AACTGGACCA TTGTGCTATT TAATACAGAA
AATCCATTCT TACTTGCCGT ATTACCCCCT GGCGCCTTTT TAGGCATGGG CCTGTTAATT
GCAATAAAAA ATAGTATCGA TGCCAAAATA GCGGCGCAGC AGACTGCCCC GACAGAAAAA
GCAGCGCGTG TTCGGGTTAC AGCGGAAAGC TAA
 
Protein sequence
MTDFRDLSLQ GLWKNNPALV QLLGLCPLLA VTATFINGLG LGLATMLVLI GSNVTVSLVR 
NVVRNEIRIP VFVMIIAAFV TIVQLLMNAF TYELYLALGI FIPLIVTNCA IIGRAEAFAS
KNGPLASAYD GLMMGLGFTA VLVILGGMRE ILGAGTLLTG ADRLFGPIAE NWTIVLFNTE
NPFLLAVLPP GAFLGMGLLI AIKNSIDAKI AAQQTAPTEK AARVRVTAES