Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02727 |
Symbol | |
ID | 6776413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 2968807 |
End bp | 2970822 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642756172 |
Product | excinuclease ABC subunit B |
Protein accession | YP_002127017 |
Protein GI | 196157528 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGAG GGTTTGAGCT TCATTCTAAA TACAAGCCAG CGGGCGACCA GCCTAAGGCG ATAGAAGCTT TAGTGGACGG TTTAGAAAGC GGGTTGGCGG GTCAAACACT CTTAGGGGTG ACGGGGTCGG GTAAAACCTT CACCATGGCG AATGTTATTA AAGAAGTTCA GCGCCCCACG CTTATTCTTG CGCACAACAA AACCCTGGCA GCACAGCTAT ATGGGGAAAT GAAGGAATTC TTTCCTAATA ATGCGGTGGA GTACTTTGTT TCTTACTATG ACTATTACCA GCCCGAAGCT TATGTACCAA GTACAGATAC CTTTATAGAG AAAGACGCGT CTATTAATGA CCACATTGAA CAAATGCGAC TATCGGCCAC CAAAGCGCTG ATGGAGCGCA GAGACGTTGT TATTGTGGCA AGTGTGTCTG CCATTTATGG TTTGGGCGAC CCTGAATCTT ACATGAAAAT GTTGTTGCAC CTACGTCAGG GCGACACCAT GGACCAGCGT GATATCTTAC GTCGCCTTGC AGAGTTACAG TACAAACGCA ACGATTTAGC CTTTGAGCGA GGCACGTTTC GAGTTCGAGG CGATGTGATA GATATCTTCC CCGCTGACTC AGAGAAGCAA GCGGTAAGGG TGGAATTGTT TGACGACGAA ATTGATAAGA TTAGTTTATT CGACCCTTTA ACTGGGGCGG TAGATAAGTC AGTGATCCGC GCCACCGTTT TTCCGAAAAC TCACTACGTA ACACCACGAG AAAAAATATT AAATGCCATT GAGCATATTA AGGATGAACT CGGAGGGCGC AAAAAGCAGC TTCAAGAGGC AAATAAACTT ATTGAAGAGC AGCGCATTTC TCAGCGAACT CAGTTCGATA TCGAGATGAT GATGGAACTA GGCTACTGCT CGGGCATAGA AAACTATTCT CGTTATCTTT CTGGCCGCGC TCCGGGCGAG CCGCCACCTA CATTATTGGA CTATTTTCCG GCTGATGGTT TGATGTTTAT CGACGAGTCT CACGTTACGG TTTCTCAAGT CGGTGCTATG TATCGAGGTG ACCGGTCGAG AAAAGAAACG CTAGTGGAGT TTGGGTTTCG ACTGCCGTCT GCCCTAGATA ATAGGCCGTT AAAGTTTGAA GAGTTTGAGC AAATTTGCCC TCAAACGATT TATGTGTCGG CGACACCGGG TGATTACGAA CTAAGGAAAA CAGAGGGCGA GATTGTCGAG CAGGTCGTAC GCCCAACAGG CTTACTCGAC CCCATTATTG AAGTTCGCCC CGTTGCTACG CAAGTTGACG ATGTACTGTC TGAAATTAAA AAACGTGTTG AGCTAGATGA ACGGGTACTC ATCACTACGC TCACTAAGCG CATGGCCGAA GATTTAAGTG AATATTTAAA TGAACACGGC GTTAAAGTGC GTTATCTGCA CTCGGACATA GATACCGTTG AACGTATTGA GATCATTCGC GATCTACGCT TAGGTAAATT CGATGTGCTG GTGGGGATTA ACCTGTTGCG TGAAGGTTTG GACATGCCCG AGGTATCATT GGTTGCTATT TTAGATGCAG ACAAAGAAGG CTTTTTGCGT GCAGAGCGCT CTCTTATTCA AACCATAGGT CGTGCCGCGC GACACATAAA CGGTCGTGCC ATACTGTATG CAGACACGAT TACCAAGTCG ATGAAAAAAG CGATGGACGA AACCGAACGT CGTCGTGAAA AGCAAATGGC TCACAACGAA GCAAATAACA TTACCCCCAT GCGACTTAAT AAACCTATTA CCGATATCAT GGATTTAGGG GAAAGTGCGC ATCCTGCATC AGGTAAGGTA AGGCTTAGAA AAGTTGAAGA GAAGAAGAGT AAACAAAAAG CAGCGAGTGC GACTGAGTTG ATGGATCAAA TTACCGAACT TGAAAAGCAA ATGTTCGAAT ATGCCCGCGA GTTAGAGTTT GAAAAGGCTG CATCGCTACG CGACGATATT GAAGCACTAC GCAAGCAAGT TGTCGCGCTC TCCTAA
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Protein sequence | MSRGFELHSK YKPAGDQPKA IEALVDGLES GLAGQTLLGV TGSGKTFTMA NVIKEVQRPT LILAHNKTLA AQLYGEMKEF FPNNAVEYFV SYYDYYQPEA YVPSTDTFIE KDASINDHIE QMRLSATKAL MERRDVVIVA SVSAIYGLGD PESYMKMLLH LRQGDTMDQR DILRRLAELQ YKRNDLAFER GTFRVRGDVI DIFPADSEKQ AVRVELFDDE IDKISLFDPL TGAVDKSVIR ATVFPKTHYV TPREKILNAI EHIKDELGGR KKQLQEANKL IEEQRISQRT QFDIEMMMEL GYCSGIENYS RYLSGRAPGE PPPTLLDYFP ADGLMFIDES HVTVSQVGAM YRGDRSRKET LVEFGFRLPS ALDNRPLKFE EFEQICPQTI YVSATPGDYE LRKTEGEIVE QVVRPTGLLD PIIEVRPVAT QVDDVLSEIK KRVELDERVL ITTLTKRMAE DLSEYLNEHG VKVRYLHSDI DTVERIEIIR DLRLGKFDVL VGINLLREGL DMPEVSLVAI LDADKEGFLR AERSLIQTIG RAARHINGRA ILYADTITKS MKKAMDETER RREKQMAHNE ANNITPMRLN KPITDIMDLG ESAHPASGKV RLRKVEEKKS KQKAASATEL MDQITELEKQ MFEYARELEF EKAASLRDDI EALRKQVVAL S
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