| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02722 |
|---|
| Symbol | asnB |
|---|
| ID | 6775259 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 2963420 |
|---|
| End bp | 2965090 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642756167 |
|---|
| Product | asparagine synthetase B |
|---|
| Protein accession | YP_002127012 |
|---|
| Protein GI | 196157523 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGTA TTTTCGGTAT CCTTGATATC AAAACCGATG TGTCTGAACT CAGAACCCAA
GCCCTCGATT TATCTAAACT TTTGCGCCAC CGTGGCCCTG ACTGGTCGGG TATCTGGAAT
AATGACAATA CCATTCTTTG TCACGAAAGA TTGGCGATTG TCGACGTAGA CACAGGTGCG
CAGCCTCTTA TCAGCCAAAA CGATAAGCAA ATCCTTGCGG TTAACGGCGA GATTTATAAC
CACAAGCAAC TTGCTGCTGA CTTAGATGAG CCTTATCCGT TTAAAACCCG TTCAGATTGT
GAAGTTATTC TTCCTCTTTT CCAGCAAAAA GGCGTGGATT TCATTGACGA ACTAGAAGGT
ATGTTCGCCT TCATTCTTTA CGACGAAGAG CAAGATGCCT ACCTGATTGC CCGCGACCAT
ATCGGAATTA TTCCGCTCTA TACCGGTTAC GACGAGCACG GCAACTTCTA CGTATCATCT
GAAATGAAGG CGCTAGCAGG CGTGTGTAAA ACGATTAGCG AATTCCCTCC TGGCCACTAT
CTGTGGAGCA AAGAAGGTAA AATCACTAAG TATTACAAGC GCGACTGGAT GGAATACGAC
AACGTAAAAG ACAACACCAG CGATTTAGAC GAACTACGTG TAGCGTTTGA AAAAGCGGTG
AAGTCTCACA TGATGTCTGA CGTGCCGTAC GCTGTACTAT TATCTGGCGG CTTAGATTCA
TCTCTGGTAT CCGCTGTTGC TGCACAGTAC GTAGCAAAGC GTGTAGAAGA TGAAGACAAA
ACCGATGCGT GGTGGCCTCG TTTACACAGC TTTGCGGTGG GTCTTGAAGG TGCGCCAGAT
TTAAAAGCGG CGAAGAAAGT GGCGGATATG ATTGGTACTG TTCACCATGA AATCCATTTC
ACCATTCAAG AAGGTTTAGA TGCCATCCGC GATGTTATCT TCCATCTAGA AACCTACGAT
ACGACAACGA TTCGTGCAGC TACTCCTATG TATCTAATGA CCCGTAAGAT TAAAGCGATG
GGTATCAAAA TGGTACTATC TGGGGAAGGC TCAGATGAAA TCTTTGGCGG CTACCTGTAT
TTCCACAAAG CACCGAACGC AAAAGAGTTC CACGAAGAAA CCGTACGTAA GCTAGATCGC
CTCCACATGT TCGACTGTGC TCGTGCTAAC AAAGCGACCT CAGCCTGGGG TGTAGAAGCG
CGCGTTCCTT TCTTAGATAA GAACTTCATT GACGTCGCCA TGCGCCTAAA CCCACAAGAC
AAGATGTGTC TTGACGGCAA AATGGAGAAG TGGATCTTGC GTAAAGCATT TGATAACGGC
GAGACACTTC CGGCGGAAGT ATTGTGGCGT CAAAAAGAAC AGTTTGGTGA CGGTGTAGGT
TACTCGTGGA TTGACTCAAT TCGCGATTTC GTGGAAAACG AAGTAACAGA CCAACAGCTA
GCAACGGCCG AATTCAGGTT CCCTGTTAAT ACGCCAGACA CGAAGGAAGG TTACTACTAC
CGCACTATCT TCGAAGGGTA CTTTCCTCAA GAAAGCGCAG CGCGTTGTGT GCCTGGCGGT
AAATCTATTG CGTGTAGTAC CGCAGAAGCC CTTGAGTGGG ACGAAAGCTT TAAGAACAAT
GCAGACCCTT CTGGTCGCTC AATGAAAGAC GTTCACGCGG GCGAATCATA A
|
|---|
| Protein sequence | MCGIFGILDI KTDVSELRTQ ALDLSKLLRH RGPDWSGIWN NDNTILCHER LAIVDVDTGA
QPLISQNDKQ ILAVNGEIYN HKQLAADLDE PYPFKTRSDC EVILPLFQQK GVDFIDELEG
MFAFILYDEE QDAYLIARDH IGIIPLYTGY DEHGNFYVSS EMKALAGVCK TISEFPPGHY
LWSKEGKITK YYKRDWMEYD NVKDNTSDLD ELRVAFEKAV KSHMMSDVPY AVLLSGGLDS
SLVSAVAAQY VAKRVEDEDK TDAWWPRLHS FAVGLEGAPD LKAAKKVADM IGTVHHEIHF
TIQEGLDAIR DVIFHLETYD TTTIRAATPM YLMTRKIKAM GIKMVLSGEG SDEIFGGYLY
FHKAPNAKEF HEETVRKLDR LHMFDCARAN KATSAWGVEA RVPFLDKNFI DVAMRLNPQD
KMCLDGKMEK WILRKAFDNG ETLPAEVLWR QKEQFGDGVG YSWIDSIRDF VENEVTDQQL
ATAEFRFPVN TPDTKEGYYY RTIFEGYFPQ ESAARCVPGG KSIACSTAEA LEWDESFKNN
ADPSGRSMKD VHAGES
|
|---|
| |