| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02700 |
|---|
| Symbol | fadJ |
|---|
| ID | 6776488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 2934194 |
|---|
| End bp | 2936353 |
|---|
| Gene Length | 2160 bp |
|---|
| Protein Length | 719 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642756145 |
|---|
| Product | multifunctional fatty acid oxidation complex subunit alpha |
|---|
| Protein accession | YP_002126990 |
|---|
| Protein GI | 196157501 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAGG AACAAGAAAT GACAAATGAA GTTCAGCCAA CATCTGGCGC ATTCACGTTA
ACAAAGCAGG ATAATGGCGT TGCTATTCTT AGCATGGACG TGCCTGGCGA AAGTATGAAT
ACGCTTAAAG CGGAATTCGG CGATGAAATC TCTACCATGC TCGATGATAT TGAGCGTGAT
AGCAGCATTA AAGGTGTAGT CCTTACCAGC GGTAAGCCTA CCTCGTTTGT GGCAGGTGCA
GATATCAGTA TGCTTGCTGA GTGTAAAACT GCTGAAGACG CCACCACCAT TGCTGCTGGT
GGCCAAGCCA TTTTCGATAG AATTGAAAAC ATGAAGGCGA CGTTTGTTGC CGCTATTCAT
GGCCCTGCAT TAGGCGGTGG TTTAGAGCTA GCATTGGCGT GTCACTATCG TGTATGTACC
GATTCACCGA GTACTCAGGT AGGTTTACCT GAAGTTCAGC TAGGCTTGCT GCCGGGCAGT
GGTGGTACAC AGCGTCTTCC TCGTCTAATT GGCGTTCAGC AAGCAATGAA GATGATGCTT
ACGGGCTCTC CTGCGCGAGC CAAACAAGCC AAAAAATACG GCATTGTAGA CGATGTAGTG
CCGCATAGCG TGCTGTTAAA AGTGGCAGAG CAGTTTGCTC TTAAGCGCAA GCCTGAACGT
GAAGCACCGC AAAAAAGCGT GATGGACAAA ATGTTAGAAA AGACCGGCCC AGGCCGTAAC
ATGATGTTCA AAAAAGCGCG CGAAGCGACC TTTGCAAAAA CGAAAGGCAA CTACCCTGCA
CCTGGCCATA TCATCGATGT TATCGAAACT GGTATCAACG AAGGTATGAA AGCGGGCCTT
AAAGCCGAAG CAGAAGCGTT CGGTAAGCTT GTCATGACCC CTGAGTCATT CCAACTTCGC
CAAATTTTCT TCGCGACAAC GGAAATGAAG AAAGAAAACG GTGTTGAAGG TGTTAAACCT
GAAAAGATGA AAAAGGTCGG CGTGCTTGGC GGTGGTTTAA TGGGCGGTGG TATTGCCTAT
GTAACTTCAA CGAAAGCGGG CGTACCTGTG CGTATTAAAG ATGTCCGCGC TGAAGGCATC
GCTAACGCAA TGAAATACAG TTACGACATT TTAAACAAGA AGGTGAAGAA GCGTTTCATG
CGTAACAGCG AAATGCAGAA GCAACTTGCG CTATTAACCG GAACGTTAGA TTACAGCGGT
TATCAAGATG TAGATATTGT TGTAGAAGCT GTTTTTGAAG ACTTAGATCT TAAGCAAAAA
ATGGTGGCGG ATATTGAAGA AAACTGCAAA GAAAGCACCA TCTTTGCGTC TAACACTTCG
TCGATCCCTA TTACGCAGAT CGCGGCAGAA GCAGCACGTC CAGAAAACGT GATTGGCCTA
CATTACTTCT CGCCAGTAGA CAAAATGCCG CTAGCTGAAG TTATTGCGCA TGAGAAAACG
TCAGACCAAG TAATTTCTTC AACGGTTGAG TTTGCTAAAA AACAAGGTAA AACGCCGGTT
GTAGTTAAAG ACGGCGCGGG CTTCTACGTA AACCGCATTT TAGCCCCGTA CATGAACGAA
GCGGCAAACC TTATTCTTGA CGGTGAGCCT ATTGAGCATA TTGATAAGTC TCTGGTTAAA
TTTGGCTTCC CTGTAGGGCC TGTTAAGCTT CTTGATGAAG TGGGCATTGA TGTAGGTACC
AAGATCATCC CATTCCTTGT AGAGGCGTTT GGTGAGCGTT TCACTGCGCC TAGTGCCTTC
GACAAAGTAT TGGCCGATGG CAGAAAAGGT AAGAAGAATC AGAAAGGGTT CTATTCTTAC
AAGGGTAAAA AACCTGGTAA AGAAGTGGAT GAGTCTATCT ACGAGCTTCT TGGGCTATCA
CCTTCTGCTA AGCTAAGCGA AAAAGAAGTG GCTGAACGTT GTGTACTAAT GATGCTAAAC
GAAGCAGCGC GTTGCTTGGA TGAAGGCGTT ATTCGTAACG CTCGTGATGG TGATATCGGC
GCTATCTTCG GTATTGGCTT CCCTCCATTT TTAGGCGGAC CATTTCGCTA TATGGATATG
CTTGGCATTA AACATGTGGT TGCGCGCCTT AATCACTATG CAACAGCGGT AGGCGATAAA
TTCGCACCGG CCGATGTGTT GGTGAACATG GCGGAAAATG ATCAAACATT TTATAGTTAA
|
|---|
| Protein sequence | MSQEQEMTNE VQPTSGAFTL TKQDNGVAIL SMDVPGESMN TLKAEFGDEI STMLDDIERD
SSIKGVVLTS GKPTSFVAGA DISMLAECKT AEDATTIAAG GQAIFDRIEN MKATFVAAIH
GPALGGGLEL ALACHYRVCT DSPSTQVGLP EVQLGLLPGS GGTQRLPRLI GVQQAMKMML
TGSPARAKQA KKYGIVDDVV PHSVLLKVAE QFALKRKPER EAPQKSVMDK MLEKTGPGRN
MMFKKAREAT FAKTKGNYPA PGHIIDVIET GINEGMKAGL KAEAEAFGKL VMTPESFQLR
QIFFATTEMK KENGVEGVKP EKMKKVGVLG GGLMGGGIAY VTSTKAGVPV RIKDVRAEGI
ANAMKYSYDI LNKKVKKRFM RNSEMQKQLA LLTGTLDYSG YQDVDIVVEA VFEDLDLKQK
MVADIEENCK ESTIFASNTS SIPITQIAAE AARPENVIGL HYFSPVDKMP LAEVIAHEKT
SDQVISSTVE FAKKQGKTPV VVKDGAGFYV NRILAPYMNE AANLILDGEP IEHIDKSLVK
FGFPVGPVKL LDEVGIDVGT KIIPFLVEAF GERFTAPSAF DKVLADGRKG KKNQKGFYSY
KGKKPGKEVD ESIYELLGLS PSAKLSEKEV AERCVLMMLN EAARCLDEGV IRNARDGDIG
AIFGIGFPPF LGGPFRYMDM LGIKHVVARL NHYATAVGDK FAPADVLVNM AENDQTFYS
|
|---|
| |