| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02684 |
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| Symbol | tolB |
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| ID | 6776619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Alteromonas macleodii 'Deep ecotype' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011138 |
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| Strand | - |
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| Start bp | 2917436 |
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| End bp | 2918791 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642756129 |
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| Product | translocation protein TolB |
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| Protein accession | YP_002126974 |
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| Protein GI | 196157485 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0273488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAC TAGGTTTATG GATAGCGCTT ATTACGATGG CATTTAGTGC CAACGTGTCT
GCATCCTTAG AAATTGTGAT AACCGAGGGC GTTGATAGTG CTCGCCCCAT CGGTGTTGTG
CCATTTAAAT GGAAAGGGCA GGGCAGTATG CCCGGCGATA TTTCAAAAGT GGTGATGGCC
GATTTAATGC GAAGCGGGAA GTTTAACCCG GTATCTGTCG ACAAGATGCC ACAGTTTCCT
GAAACCGCAG AGCAAGTGTC TTACACCGCG TGGGCGACAC TAGGTGTAGA TACAGTATTA
GTAGGTAGTA TCGAACCTCA GGGCGGCGAT CGTTTCCTTG TATCTTACGA ACTAATTGAT
GTGCTTAAAG GCCAAGTAGA CAACGGCCAA GCCAAAGTGC TTAAAAACGG AAGCCTAGTA
TCAAGTAACA ACCATGTTCT TGCTGCCCGC CAAGCCGTGA TTAACGGTCG CGATTTTCGC
CAGTATGCGC ACCGAATTAG CGACATAGTG TACGAAAAGC TTACTGGCGT GCGTGGCGCG
TTTCTTACCA AAATAGCGTA CGTTATTGTT CGCGACCGCG ATACGGTAGA AAAGCCGTAT
CAATTAGTGA TTGCCGACTA TGATGGTGAA AACGAAACCC GTCTGTTGTC TTCGCCTGAG
CCGCTCATGT CGCCAGTGTG GTCGCCAGAT GGTGAGAAGC TGGCCTACGT GAGCTTTGAG
AACCGCAGAC CGCAAATTTT CATCCAGGAT ATATACACCA GTGAACGTAC GCGCATTACT
GACTTTCCAG GAATAAACAG TAGCCCTACA TTCTCGCCAG ATGGCAAGCA ACTTGCTATG
GTTTTATCGA AAGATGGAAA CCCTGAACTC TATGTGATGG ACTTAGCGAC GAAAAACCTT
CGTCGAATTA CACGCAATAG AGCGATTGAC ACGGAGCCTG CATGGCTACC CGATGGCAGC
GGTTTAATAT TTAGCTCGGA ACGGGGTGGT AAACCCCAGA TATATAGCGT AAATTTAAAT
TCTGGGAAAG TAAGGCGAGT TACCTTTGTC GGGGAACAGA ACCTTGGCGG CACGCTATCC
CCAGACGGTA AGCAAATGAT TATGGTTAAC CAAACTAATG GGAACTATCA TATTGCTAAG
CAGTCTTTGG ATGGAGGTTC ACCACAAGTA CTGACACGGA CGTACTTAGA TGAATCGCCT
AGCGTAGCGC CGAACGGAAG CATGATTATA TACAGCACCC TTCATGAGGG CACCCAAGTG
TTGTCGTTGG TTTCTCTTGA TGGGCGTTTT AAAGCTAGGT TACCAGCAGC CAATGGGCAA
GTTAAATCGC CAAGTTGGTC ACCATTTTTG TTCTAA
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| Protein sequence | MKKLGLWIAL ITMAFSANVS ASLEIVITEG VDSARPIGVV PFKWKGQGSM PGDISKVVMA
DLMRSGKFNP VSVDKMPQFP ETAEQVSYTA WATLGVDTVL VGSIEPQGGD RFLVSYELID
VLKGQVDNGQ AKVLKNGSLV SSNNHVLAAR QAVINGRDFR QYAHRISDIV YEKLTGVRGA
FLTKIAYVIV RDRDTVEKPY QLVIADYDGE NETRLLSSPE PLMSPVWSPD GEKLAYVSFE
NRRPQIFIQD IYTSERTRIT DFPGINSSPT FSPDGKQLAM VLSKDGNPEL YVMDLATKNL
RRITRNRAID TEPAWLPDGS GLIFSSERGG KPQIYSVNLN SGKVRRVTFV GEQNLGGTLS
PDGKQMIMVN QTNGNYHIAK QSLDGGSPQV LTRTYLDESP SVAPNGSMII YSTLHEGTQV
LSLVSLDGRF KARLPAANGQ VKSPSWSPFL F
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