Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02616 |
Symbol | |
ID | 6776529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2837733 |
End bp | 2839982 |
Gene Length | 2250 bp |
Protein Length | 749 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642756057 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_002126906 |
Protein GI | 196157417 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.26266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTATCA GAACTAGCTT AAAAAAAGTA TTACCCCCAA TTTCAGTCAC AGAACAAGAA GCCCTAGACG CGGGTGACGT GTGGATTGAA TCTTCTATTT ATCAGGGTAA GCCTGACATG CAGGCGTTAC GCGATATCCC TCAGGCAAAA CTGAGCGCAG ATGAACAAGC ATTCATGGAT GGTCCAGTAG CTGAGCTACT GAACATGATC GATGACTTCG AACTAGGTAA CGGCAAGCAC ATTCCTCAGG AAGTGTTAGA TTTTCTAGGT AAGAACCGTT TCTTCTCTAT GATCATTCCA AAGAAATTTG GTGGTCTTGA GTTCAGCCCG TATGCAAATT CGACAATCGT TGCAACAATC GCAGCGAAAA GCGGCGCAAT CGCTGTAACG GTTATGGTGC CTAATTCATT AGGTCCGGGC GAGCTTCTAA TGCATTACGG TACGTCAGAG CAACAAGACT ACTGGTTACC ACGTCTTGCT GATGGCCGCG ACATTCCGTG CTTTGCACTA ACAAGCCCAG AGGCAGGTTC AGACGCAGGT GCTATCCCTG ACGCGGCAAT CGTGACTAAA GGCGAGTTTA ACGGTGAAGA AGTACTTGGT CTTCGCGTAA GCTGGGACAA GCGCTATATC ACGCTTGCTC CGATTGCAAC CGTACTTGGC CTTGCATTTA AAGTATTCGA TCCAGACCAA CTTCTTGGCG ACAAGCTAGA GCTAGGCATT ACTTGTGCCC TTCTACCTAA GTCTCACCCA GGTGTTGAGC TAGGTAACCG CCACGACCCA ATGGGTGTGC GTTTCTACAA CGGTACGACT CGTGGTCAAG ACGTGTTCAT TCCAATGGAC TTTATCATTG GTGGTCAGAA GAACATCGGT CGTGGCTGGC AGATGCTGGT TAGCTGCCTA GGTGCAGGTC GTGGTATTTC ACTTCCAGCA ATGGGTGTAG CTACCGCACA GGCTGCGTTT AAAGGCACGG TTGAGTATTC ATTCGTACGT GAGCAGTTTG GCCTTCCCAT TGGTCGCTTC GAAGGTATAC AAGAGAAAAT GGCTGACATT GCAGGTAAGA CATTCTTACT TGAAGCAATG CGTGTACTAA CAACTGAAGG CTTAGGCCTA GGCGTTAAGC CATCTGTTGT TACGGCTATT GCCAAATACC ACATGACTGA ACTTGGTCGT GACGTGATGA ACTCGGCAAT GGATATCCAA GCAGGTAAAG CGATTCAGCG CGGCCCTCAA AATACGTTGG CCGGCGGTTA CTCTGCACTT CCAATTGCGA TTACGGTAGA AGGTGCAAAC ATTCTAACCC GTAACCTTAT GATCTTCGGT CAAGGTGCAA TGCGTTGTCA CCCTTACCTG AAAGATATGG TTGACCTAAT CCACAGCAAC GAGAGTTCTG CGGATGCTGA GTTCAACAAG GTACTTCGTA AAACGGTTGG CTTTAGTGTT AAAAATGCGT TCCGCAGCCT AGGTAAAGGC TACCTTCCTT TCCTACGCGA GAGTGAGTCT GCACTACCTG AAGTACGCAA GTACGAAAAG CGTGTAAACA GCATCTCAGC GAAGCTAGCA CCACTGGCTG ACTTGTCGCT TGCAGTACTA GGCGGTGATC TTAAGAAAGC CGAGCTTTTA TCTGCACGTC TAGGTGACGT AATGAGCTAC CTATACGGTG CAATGGCCGC GATTCGTTTC TACGAGCAGC GTATTGAAGA TAGAAAACTT GCACTACCGT ACTTCGAGTA CGCTATGCAA TGGTCTTTAC AACAAGCTGA TCAGGCAATT GTTAACTTCA TCAACAATTT CCCGAACACG GCGACACGTG GTCTAATGCG CCTACTTACC AACACTTACA CCAACAGTGT TGCAGGTATT AGCGACGACC TAGTACGTGA GCTTTCAATT GCATCTATGC AAGATAACAG CGTGAAAGAC CAGCTTACGC ACCTTGTTCG CGCATGCCCT GGAGACGGTA ACGACATTAA TGAGCAAGCG TTTAAAGCGA AGCACGCGGT TGCGCATCTT CTTGGTAAAG TGCAAAAAGC ACTGCGCAAA GAGCCTGTTG TGCCGTTCAT CTCATTTGAA CATACGCTTA ATAAGCTTCA AGAAAAAGGC GTGGTTACCG CTGATGAGGC GGCTAAGCTT CACGACTACA ACGAAAAGCG CAAGTTAGCG GTTCGCGTTG ACGAATACAC GTTTGATATG GAACTTGTTC CAGCATCACA AACGCTTAAA GCGATTGACG GCGGTCAAAG CGCGGCATAA
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Protein sequence | MSIRTSLKKV LPPISVTEQE ALDAGDVWIE SSIYQGKPDM QALRDIPQAK LSADEQAFMD GPVAELLNMI DDFELGNGKH IPQEVLDFLG KNRFFSMIIP KKFGGLEFSP YANSTIVATI AAKSGAIAVT VMVPNSLGPG ELLMHYGTSE QQDYWLPRLA DGRDIPCFAL TSPEAGSDAG AIPDAAIVTK GEFNGEEVLG LRVSWDKRYI TLAPIATVLG LAFKVFDPDQ LLGDKLELGI TCALLPKSHP GVELGNRHDP MGVRFYNGTT RGQDVFIPMD FIIGGQKNIG RGWQMLVSCL GAGRGISLPA MGVATAQAAF KGTVEYSFVR EQFGLPIGRF EGIQEKMADI AGKTFLLEAM RVLTTEGLGL GVKPSVVTAI AKYHMTELGR DVMNSAMDIQ AGKAIQRGPQ NTLAGGYSAL PIAITVEGAN ILTRNLMIFG QGAMRCHPYL KDMVDLIHSN ESSADAEFNK VLRKTVGFSV KNAFRSLGKG YLPFLRESES ALPEVRKYEK RVNSISAKLA PLADLSLAVL GGDLKKAELL SARLGDVMSY LYGAMAAIRF YEQRIEDRKL ALPYFEYAMQ WSLQQADQAI VNFINNFPNT ATRGLMRLLT NTYTNSVAGI SDDLVRELSI ASMQDNSVKD QLTHLVRACP GDGNDINEQA FKAKHAVAHL LGKVQKALRK EPVVPFISFE HTLNKLQEKG VVTADEAAKL HDYNEKRKLA VRVDEYTFDM ELVPASQTLK AIDGGQSAA
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