Gene MADE_02583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_02583 
Symbol 
ID6778264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp2804762 
End bp2805853 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content45% 
IMG OID642756024 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_002126873 
Protein GI196157384 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.98424e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTTTA AATGCGGTAT TGTTGGCCTA CCTAACGTAG GTAAATCAAC ACTTTTCAAT 
GCATTAACAA AAGCAGGTAT TGAAGCGGCA AACTTCCCTT TCTGTACCAT CGAGCCAAAC
ACGGGTGTAG TGCCTGTGCC AGATCTTCGT TTGGACAAGT TGGCTGAAAT CGTAAACCCT
CAGCGCGTCA TTCCTACTAC GATGGAATTC GTTGATATTG CGGGTTTGGT TGAAGGCGCG
TCTAAAGGTG AAGGTTTAGG TAATAAATTC CTTGCTAACA TTCGTGAAAC CGACGCTATC
GGTCACGTAG TTCGCTGCTT CGACGATGAA AACATTGTTC ACGTTGCAGG TCGCGTTAGC
CCGAAAGATG ATATTGACGT TATTAATACC GAGCTTGCGC TTTCAGACTT AGAAACCACA
GAAAAAGCAC TGCATCGCGT AGCGAAGCGC GCTAAAGGTG GCGATGCTGA TGCCAAGTAC
GAAATGAAAG TACTTGAGAA GATTAAGCCG CATCTAGATG AAGGCTTGTT ACTTCGCTCG
CTGGAGCTAA GCAAAGAAGA GCTTGAAGCG ATTAGCTACA TGAACATGCT AACCCTTAAG
CCAACCATGT ACATTGCTAA CGTTAATGAA GACGGTTTTG AAAATAACCC GTATCTTGAT
CAAGTAAAAG AAATTGCTGC AGGTGAAAAC GCTACGGTTG TTGCGGTTTG TGCATCTATT
GAATCTGACA TTGCAGAGCT TGAAGACGAC GAGCGTGAAG AATTCATGCA GGATATGGGC
TTAGAAGAGC CGGGTCTTAA CCGTGTTATT CGTTCAGGTT ACAACTTGCT TACTCTGCAA
ACCTACTTTA CTGCAGGTGT AAAAGAAGTT CGCGCATGGA CATTCCCAGA AGGGTCTACA
GCGCCGCAAG CAGCGGGTAA AATTCACACC GACTTCGAGA AAGGCTTTAT TCGCGCTGAA
ATCGTAAGCT ACGATCATTT TGTTGAGTTT AACGGCGAAC AGGGTGCAAA AGACGCAGGT
AAATGGCGTC TTGAAGGTAA AGACTATATT GTTAAAGACG GCGACGTTAT TCACTTCCGC
TTTAACGTGT AA
 
Protein sequence
MGFKCGIVGL PNVGKSTLFN ALTKAGIEAA NFPFCTIEPN TGVVPVPDLR LDKLAEIVNP 
QRVIPTTMEF VDIAGLVEGA SKGEGLGNKF LANIRETDAI GHVVRCFDDE NIVHVAGRVS
PKDDIDVINT ELALSDLETT EKALHRVAKR AKGGDADAKY EMKVLEKIKP HLDEGLLLRS
LELSKEELEA ISYMNMLTLK PTMYIANVNE DGFENNPYLD QVKEIAAGEN ATVVAVCASI
ESDIAELEDD EREEFMQDMG LEEPGLNRVI RSGYNLLTLQ TYFTAGVKEV RAWTFPEGST
APQAAGKIHT DFEKGFIRAE IVSYDHFVEF NGEQGAKDAG KWRLEGKDYI VKDGDVIHFR
FNV