Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02573 |
Symbol | prfA |
ID | 6778212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 2796383 |
End bp | 2797468 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642756013 |
Product | peptide chain release factor 1 |
Protein accession | YP_002126863 |
Protein GI | 196157374 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0263327 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAGT CGGTAGTTAG GAAACTCGAA CACTTAGTCG AGCGTTTCGA AGAAGTTCAG GCGCTGTTAG GCGACCCTGA AGTTATCGGC GATCAAGATA AGTTTCGCAA CTTGTCCAAA GAGTTTAGCC AGTTAGAAGA TGTTGTTGCC GGGTTTAATG CCTATCAACA GGCACAAGAA AACTTGGCAT CTGCGCAAGA AATGCTAAAT GAAGACGACG CCGAGATGCG CGAAATGGCA CAAGAAGAGA TGAAAGAAGC GAAGGGCGAA ATAGAGCGCC TTGAAACTGA ACTTCAAGTC TTGCTTTTGC CTAAAGATCC TAACGACGAT AATAACTGCT TCTTGGAAAT CCGCGCTGGG GCGGGTGGTG ATGAGGCGGC TATTTTCGCC GGTGACCTTT TCCGTATGTA CAGTCGTTAT GCTGAGAGTC GCGGTTGGCG TGTAGAGTTG GTGAATGCAA ACGAAAGCGA ACACGGCGGC TACAAAGAAG TAGTTGCTAA TGTTAGTGGT GATGGTGTTT ACGGTGTGTT GAAATTCGAA TCAGGCGGTC ACCGCGTACA GCGCGTACCT GAGACCGAGT CACAAGGGCG TATTCATACC TCCGCGTGTA CCGTTGCGGT ACTGCCAGAA ATTCCTGAGT CAGAAGCCAT TGAAATTAAC CCAGCAGAGC TTCGAATCGA TACATTTCGT GCATCTGGTG CTGGTGGTCA GCACGTTAAT AAAACTGACT CAGCTATCCG TATTACTCAC TTGCCAACAG GCTTAGTGGT TGAATGTCAG GACGAGCGTT CGCAGCACAA AAACCGTGCT AAAGCGATGT CAGTACTGCA AGCTCGCCTA AACCAGATTG AAGAAGAAAA ACGCGCTGCA GAAGAGGCGT CTACCCGTAA GAGCTTAGTG GGTAGCGGCG ATCGTTCTGA GCGTATTCGC ACTTATAACT TTCCCCAAGG TCGCGTTACC GATCATCGTA TCAACTTAAC CATCTATCGA TTAGATGAAG TGGTAGAAGG CGATTTGAAG CAGCTTGTCG ACCCCATTCT GCAAGAGCAT CAAGCCGACT TGTTGGCGTC ACTGTCTGAC GAATAA
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Protein sequence | MKESVVRKLE HLVERFEEVQ ALLGDPEVIG DQDKFRNLSK EFSQLEDVVA GFNAYQQAQE NLASAQEMLN EDDAEMREMA QEEMKEAKGE IERLETELQV LLLPKDPNDD NNCFLEIRAG AGGDEAAIFA GDLFRMYSRY AESRGWRVEL VNANESEHGG YKEVVANVSG DGVYGVLKFE SGGHRVQRVP ETESQGRIHT SACTVAVLPE IPESEAIEIN PAELRIDTFR ASGAGGQHVN KTDSAIRITH LPTGLVVECQ DERSQHKNRA KAMSVLQARL NQIEEEKRAA EEASTRKSLV GSGDRSERIR TYNFPQGRVT DHRINLTIYR LDEVVEGDLK QLVDPILQEH QADLLASLSD E
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