| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02520 |
|---|
| Symbol | |
|---|
| ID | 6776770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | + |
|---|
| Start bp | 2735665 |
|---|
| End bp | 2736972 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642755959 |
|---|
| Product | guanine deaminase |
|---|
| Protein accession | YP_002126810 |
|---|
| Protein GI | 196157321 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | [TIGR02967] guanine deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCTTT TTCGTGCAAG CATTGCGCAC TTTCCTAAAC AAACCACACA ATTTACTGAC
GACATTGCCA TTTTCAAAGA CGGTGGTTTG TTGATTGATA AAAAAGAAAT AAAAGATATC
GGCGATTTCG ATACCATTGC AGCGCGCTAT CCTGCGGCCA GCGTTACCGA CTTGACGGGT
AAGTGGATAC TGCCAGGTTT AATTGACAGC CATTTGCACT ACCCGCAGAC ACAAAGCATT
GCGCACTACG GCGAACAGCT TCTTACTTGG CTTGAAAACT ACACCTTCCC GGCTGAAATG
CAGTTTGCAG ATAGCGAACA TGCCAACACC ATAGCAAAAG TGTTTTTAAA TCAGCTCTTG
AAAAACGGCA CCACCACCGG TTTTGTGTTT ACCACTGTGC ACAAAAGCAG TTGCCAAGCC
CTGTTTAATG CCGCAAGCGA TATCGACATG GCTATTGTCG CAGGCAAAGT GTGCATGGAT
AGAAACTGCC CAAGCCAGCT TACTGACTGT ACTGAGAGTG CGCAGGCCGA CAGTGCCAGC
TTAATTGAAA CTTGGCATAA CAAGGGGAGA AATCGTTACG CGTTAACCCC TCGCTTCGCG
CCAACAAGCA CAGAAGCCCA ACTTGCGGCA TTAGGTGAAT TGGCGCAGCA GTACAGTGAT
GTTTTCATAC AAACTCACTT ATCTGAGAAC CTAGATGAAA TTGCCTGGGT GAAAAGTCTA
TTCCCGCAGG CTGATGGCTA TTTAGATGTT TATGATAAAT ATAATCTCGT GCGTGAGCGC
GCCGTTTTTG GCCATGGTAT CCATTTAACG CCTGATGAAT GGGGTCGGTT AGGAGAAAGT
GGTGCAACCG TGGCCTTTTG CCCTACGTCA AACCTGTTTT TAGGAAGCGG TCTTTTTGAT
ATGACCGCTG CCCGTGCCAA TAAGGTTCAT GTGGCCATGG CTACCGACGT GGGTGCAGGT
ACCACCTTTA ACATGTTTAA GACCTATGGC GATGCCTACA AGGTGAGTCA ACTGAGAAAC
GACCCATTAA GCCCACTTGA AGGCTTTTAC CTTATGACAC AAGGGGCGGC CATCGCCCAT
GGCCTTGATG AGGAAATCGG TAATTTAAAC CCAGGGACTA TCGCAGACTT TATTGTGGTA
GAGCCCAGAT TCGATGAACT GACAAGTTTA AGAATTCAAC AAGACGCCGA TTTCGATGAT
GTATTTTTTG CCTTAAGTAT TTTAGGCGAT GATCGCGCAA TTGCGCAAAC TTGGATCAGT
GGTAACTGTT GCTATGAAAA AAGCAGCGGT AATAACGAGC TACAGTAG
|
|---|
| Protein sequence | MQLFRASIAH FPKQTTQFTD DIAIFKDGGL LIDKKEIKDI GDFDTIAARY PAASVTDLTG
KWILPGLIDS HLHYPQTQSI AHYGEQLLTW LENYTFPAEM QFADSEHANT IAKVFLNQLL
KNGTTTGFVF TTVHKSSCQA LFNAASDIDM AIVAGKVCMD RNCPSQLTDC TESAQADSAS
LIETWHNKGR NRYALTPRFA PTSTEAQLAA LGELAQQYSD VFIQTHLSEN LDEIAWVKSL
FPQADGYLDV YDKYNLVRER AVFGHGIHLT PDEWGRLGES GATVAFCPTS NLFLGSGLFD
MTAARANKVH VAMATDVGAG TTFNMFKTYG DAYKVSQLRN DPLSPLEGFY LMTQGAAIAH
GLDEEIGNLN PGTIADFIVV EPRFDELTSL RIQQDADFDD VFFALSILGD DRAIAQTWIS
GNCCYEKSSG NNELQ
|
|---|
| |