Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02484 |
Symbol | |
ID | 6778711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 2698572 |
End bp | 2699006 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642755923 |
Product | Translation initiation factor 3 |
Protein accession | YP_002126774 |
Protein GI | 196157285 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00212518 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTTCGC TAGCAGAAGC TACGCGTACC GCTGAAGAAG CGAGCCTAGA TCTAGTAGAA ATCAGTCCGA ATGCCGAGCC GCCAGTCTGT AAAGTTATGG ACTATGGCAA ATTCCTCTTC GAAAAAAGTA AAGCTCAAAA AGAGCAGAAG AAAAAACAAA AGCAAATTCA GGTCAAGGAG ATTAAATTTC GCCCTGGCAC TGATGAAGGC GATTACCAGG TAAAACTGCG CAACCTGCGT CGCTTTCTTG AAGGTGGTGA CAAAGCCAAA GTTACGATCC GCTTCCGCGG TCGTGAAATG GCGCACCAAG ACATCGGTAT CGATTTGCTA AACCGCGTTA AAACGGATTT AGAAGAAATC GCTACATGCG AGTCTTTCCC ACGCCGTGTG GAAGGCCGTC AGATGATCAT GGTGCTAGCC CCAAATAAGA AGTAG
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Protein sequence | MVSLAEATRT AEEASLDLVE ISPNAEPPVC KVMDYGKFLF EKSKAQKEQK KKQKQIQVKE IKFRPGTDEG DYQVKLRNLR RFLEGGDKAK VTIRFRGREM AHQDIGIDLL NRVKTDLEEI ATCESFPRRV EGRQMIMVLA PNKK
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