| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02482 |
|---|
| Symbol | rplT |
|---|
| ID | 6778710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 2697881 |
|---|
| End bp | 2698237 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642755921 |
|---|
| Product | 50S ribosomal protein L20 |
|---|
| Protein accession | YP_002126772 |
|---|
| Protein GI | 196157283 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0292] Ribosomal protein L20 |
|---|
| TIGRFAM ID | [TIGR01032] ribosomal protein L20 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0118803 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAGAG TAAAACGCGG CACTATCGCA CGTGCTCGTC ACAAAAAAGT CCTCAAGCAG
GCAAAAGGTT ATTACGGCGC ACGTTCACGT GTATATCGCG TAGCGGTACA AGCTGTAACT
AAAGCTGGTC AATATGCTTA CCGTGACCGT CGTCAGCGCA AGCGTCAATT CCGTCAACTA
TGGATTGCAC GTATCAATGC TGCTGCACGT CAAAATGGTA TGTCATACAG CCGTTTCATT
AACGGTTTGA AGAAAGCGTC TGTTGAAATC GATCGTAAGA TCCTTGCCGA CATCGCAGTA
CATGACAAAG CAGCTTTCAG CGCACTAGTC GAAGCGGCTA AAGGCGCATT AGCTTAA
|
|---|
| Protein sequence | MARVKRGTIA RARHKKVLKQ AKGYYGARSR VYRVAVQAVT KAGQYAYRDR RQRKRQFRQL
WIARINAAAR QNGMSYSRFI NGLKKASVEI DRKILADIAV HDKAAFSALV EAAKGALA
|
|---|
| |