Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_02430 |
Symbol | |
ID | 6778353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | + |
Start bp | 2633062 |
End bp | 2633871 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642755869 |
Product | exodeoxyribonuclease III |
Protein accession | YP_002126720 |
Protein GI | 196157231 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.977241 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTTA TCTCCTTTAA TATAAATGGT ATTCGCGCTC GCTTACACCA GCTACAAGCC GTTATCGATG CCCACCAGCC TGACATAATC GGGCTTCAGG AAATTAAGGT TCACAATGAG CAGTTTCCTG TTGAAGCAGT AGAAGCAATG GGCTACCACG TTTACTTCCA CGGTCAAAAA AGCCATTACG GTGTCGCCTT CTTAGCTAAA AAAGAGCCTT TATCAGTAAC TATGGGCTTT CCCACGGATG AAGAAGACGC GCAACGTAGA ATGATCATAT TAAAAACTAC CGATGACGCT GGCCAGCCTG TCACTATCCT GAACGGTTAT TTCCCGCAGG GTGAAAACGA AAAGCATGAA ACCAAGTACC CAGCCAAACG TAAGTTTTAT AAAGATTTAA TGACCTATCT GGATGAAAAC CACACGCCAG AAGACAATGT AATTGTGATG GGTGATGTAA ACATTTCTCA CACAGACCTC GATATTGGCA TTGGTGAAGA AAACCGCAAG CGTTGGCTAC GAACAGGCAA GTGCAGCTTC TTGCCAGAAG AGCGCGAGTG GCTCAACACC CTCTTCAGCT GGGGTTTCGA AGATAGCTTC CGTACGTTAA ACCCTGAAAC AAACGAAAGG TTTTCGTGGT TTGATTATCG CTCTAAGGGG TTTAATGACA ACCGAGGTCT TCGTATTGAT TTGATCTTGG CAACAAAGTC TCTTCATAGC ACGCTTGTTG ATGCTGGCAT TGACTACGAG CTTCGCGGTA TTGAGAAGCC CTCTGACCAC GCCCCAATCT GGGCTGAGTA CAAAAGTTAA
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Protein sequence | MKVISFNING IRARLHQLQA VIDAHQPDII GLQEIKVHNE QFPVEAVEAM GYHVYFHGQK SHYGVAFLAK KEPLSVTMGF PTDEEDAQRR MIILKTTDDA GQPVTILNGY FPQGENEKHE TKYPAKRKFY KDLMTYLDEN HTPEDNVIVM GDVNISHTDL DIGIGEENRK RWLRTGKCSF LPEEREWLNT LFSWGFEDSF RTLNPETNER FSWFDYRSKG FNDNRGLRID LILATKSLHS TLVDAGIDYE LRGIEKPSDH APIWAEYKS
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