| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02333 |
|---|
| Symbol | |
|---|
| ID | 6778974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 2520172 |
|---|
| End bp | 2521374 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642755772 |
|---|
| Product | 3-oxoacyl-(acyl-carrier-protein) synthase II |
|---|
| Protein accession | YP_002126623 |
|---|
| Protein GI | 196157134 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000116655 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTCAC CATTAGGTCT TAATAGCGAA GACACATGGC GCAAATTGCT CGCGGGCGAG
AGCGGCATCG GTGAAATCAC CCATTTTGAT TGCAGTAACT ATTCAACCCG TTTCGCAGGT
CAAATTAACG ACTTTGATCC GCAGGAATAC ATAGAAAAGA AAGAAACCAA GAAAATGGAC
CGCTTTATCC AGTTGGGTAT CGCTGCCGGC AAACAAGCCT TGGTCGATTC TGGTTTTACT
GTTTCACCAG ACAATGCGCA CCGTGTAGGC GTAGCTATTG GTTCAGGAAT TGGTGGTTTA
GAGCAAATTG AACAAAACCA CTTAAAACTG ACAAATAGCG GTCCTAAGCG CGTGTCGCCA
TTTTTTGTGC CATCAACCAT TACCAATATG ATTTCAGGTT TTTTGTCTAT CATGGAAGGG
TTGAAAGGAC CGAATTTGAA CATTGTGACT GCTTGTACTA CAGGTGTTCA CAATATAGGT
ATTGCCGCAA GAACCATTGC TTACGGCGAT GCTGATGCCA TGCTTGCAGG CGGCGCAGAG
GCGTCAATTA CGCCGCTAGG AATGGCTGGT TTTGCCGCTG CGCGAGCCCT GTCTTCGCGC
AACGACGATC CACAAGCCGC AAGCCGCCCA TGGGATAAAG ACCGTGATGG TTTTGTCATG
GGTGAGGGCG CTGGCGTAGT TATGCTTGAA GAATACGAAG CCGCTAAGGC CCGTGGTGCG
ACTATCTATG CTGAGCTTGT TGGTTTCGGT ATGAGTGGCG ATGCCTATCA CATGACATCA
CCGCCAGCAG ATGGCGAAGG TGCCGCGGCG TCAATGCAAA ATGCAATTAA CGACGCCAAG
TTAGATGCGA GCGAAATTGG TTATGTTAAC GCACACGGTA CCTCAACCCC TGCCGGTGAT
ATTGCCGAAG TCGCCGCGGT AAAACGCGTA TTTAACGACC ACGCATACAA ACTGCTGGTT
AGCTCAACAA AGTCGATGAC GGGTCATTTA CTTGGTGCAG CAGGATCAGT TGAAGCCATC
TTCACTATTT TGGCACTGCG TGACAAAATG GCGCCACCGA CCATCAACTT AGATGAGCCG
GGCGAAGGCT GTGACCTAGA CTTCGTGGCA AATAAAGCCA AAGCCTTCAG CGAAGATTAC
GCGCTATGTA ACTCTTTTGG ATTCGGCGGT ACTAACGGCT CGTTGATATT TAAGCGTATA
TAA
|
|---|
| Protein sequence | MLSPLGLNSE DTWRKLLAGE SGIGEITHFD CSNYSTRFAG QINDFDPQEY IEKKETKKMD
RFIQLGIAAG KQALVDSGFT VSPDNAHRVG VAIGSGIGGL EQIEQNHLKL TNSGPKRVSP
FFVPSTITNM ISGFLSIMEG LKGPNLNIVT ACTTGVHNIG IAARTIAYGD ADAMLAGGAE
ASITPLGMAG FAAARALSSR NDDPQAASRP WDKDRDGFVM GEGAGVVMLE EYEAAKARGA
TIYAELVGFG MSGDAYHMTS PPADGEGAAA SMQNAINDAK LDASEIGYVN AHGTSTPAGD
IAEVAAVKRV FNDHAYKLLV SSTKSMTGHL LGAAGSVEAI FTILALRDKM APPTINLDEP
GEGCDLDFVA NKAKAFSEDY ALCNSFGFGG TNGSLIFKRI
|
|---|
| |